Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306F09f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 30 0.054
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 28 0.17
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 28 0.22
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 27 0.50
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 25 1.2
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 24 2.7
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 24 3.6
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 24 3.6
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 6.2
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 23 6.2
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 23 8.2
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 29.9 bits (64), Expect = 0.054
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 199 FTLHVRLNMGGLLKKRTFYY 140
F H+R NMGGL + TFYY
Sbjct: 920 FFFHLRKNMGGLKRFSTFYY 939
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 28.3 bits (60), Expect = 0.17
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = -2
Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
L+++T +Y+ +I+P V I +S +FY+
Sbjct: 248 LRRKTLFYTVNLIIPCVGISYLSVLVFYL 276
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 27.9 bits (59), Expect = 0.22
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = -2
Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
L+++T +Y+ +I+P V I +S +FY+
Sbjct: 235 LRRKTLFYTVNLIIPCVGISFLSVLVFYL 263
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 26.6 bits (56), Expect = 0.50
Identities = 8/30 (26%), Positives = 20/30 (66%)
Frame = -2
Query: 166 LLKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
+++++T +Y+ +I+P V I + +FY+
Sbjct: 227 IIRRKTLFYTVNLILPTVLISFLCVLVFYL 256
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 25.4 bits (53), Expect = 1.2
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = -2
Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
++++T +Y+ +I+P V I ++ +FY+
Sbjct: 241 MRRKTLFYTVNLIIPCVGITFLTVLVFYL 269
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 24.2 bits (50), Expect = 2.7
Identities = 7/29 (24%), Positives = 20/29 (68%)
Frame = -2
Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
++++T +Y+ +I+P + I ++ +FY+
Sbjct: 235 MRRKTLFYTVNLIIPCMGISFLTILVFYL 263
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.8 bits (49), Expect = 3.6
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = -2
Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
++++T +Y+ II+P + I ++ FY+
Sbjct: 239 MRRKTLFYTVNIIIPCMGISFLTVLTFYL 267
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.8 bits (49), Expect = 3.6
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = -2
Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
++++T +Y+ II+P + I ++ FY+
Sbjct: 239 MRRKTLFYTVNIIIPCMGISFLTVLTFYL 267
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.0 bits (47), Expect = 6.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 183 RTCRVNNSIYLDHYSLLITY 242
R C+ + SIY D +SL +Y
Sbjct: 428 RRCQRSRSIYFDTHSLYCSY 447
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 23.0 bits (47), Expect = 6.2
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 231 VMNNDPSRLNCLLYMFA 181
++N++P NC+ Y FA
Sbjct: 594 LLNDNPLHCNCIAYAFA 610
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 22.6 bits (46), Expect = 8.2
Identities = 8/32 (25%), Positives = 19/32 (59%)
Frame = -2
Query: 190 HVRLNMGGLLKKRTFYYSKYIIMPYVTIKEIS 95
++ + ++++RT YY +I+P V I ++
Sbjct: 233 YIDITFAIIIRRRTLYYFFNLIVPCVLIASMA 264
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,013
Number of Sequences: 2352
Number of extensions: 8793
Number of successful extensions: 28
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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