Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X53583-1|CAA37652.1|  576|Drosophila melanogaster alpha-2-subuni...    28   6.7  
X52274-1|CAA36517.1|  576|Drosophila melanogaster nicotinic acet...    28   6.7  
AY058446-1|AAL13675.1|  576|Drosophila melanogaster GH22843p pro...    28   6.7  
AE014297-3556|AAF56303.1|  576|Drosophila melanogaster CG6844-PB...    28   6.7  
AE014297-3555|AAF56302.2|  576|Drosophila melanogaster CG6844-PA...    28   6.7  
X07194-1|CAA30172.1|  567|Drosophila melanogaster mature acetylc...    28   8.8  
AE014297-3553|AAF56301.2|  567|Drosophila melanogaster CG5610-PA...    28   8.8  

>X53583-1|CAA37652.1|  576|Drosophila melanogaster alpha-2-subunit
           nicotinic acetylcholinereceptor precursor protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
           L+++T +Y+  +I+P V I  +S  +FY+
Sbjct: 257 LRRKTLFYTVNLIIPCVGISYLSVLVFYL 285


>X52274-1|CAA36517.1|  576|Drosophila melanogaster nicotinic
           acetylcholine receptoralpha subunit protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
           L+++T +Y+  +I+P V I  +S  +FY+
Sbjct: 257 LRRKTLFYTVNLIIPCVGISYLSVLVFYL 285


>AY058446-1|AAL13675.1|  576|Drosophila melanogaster GH22843p
           protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
           L+++T +Y+  +I+P V I  +S  +FY+
Sbjct: 257 LRRKTLFYTVNLIIPCVGISYLSVLVFYL 285


>AE014297-3556|AAF56303.1|  576|Drosophila melanogaster CG6844-PB,
           isoform B protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
           L+++T +Y+  +I+P V I  +S  +FY+
Sbjct: 257 LRRKTLFYTVNLIIPCVGISYLSVLVFYL 285


>AE014297-3555|AAF56302.2|  576|Drosophila melanogaster CG6844-PA,
           isoform A protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
           L+++T +Y+  +I+P V I  +S  +FY+
Sbjct: 257 LRRKTLFYTVNLIIPCVGISYLSVLVFYL 285


>X07194-1|CAA30172.1|  567|Drosophila melanogaster mature
           acetylcholine receptoralpha-like subunit  protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
           L+++T +Y+  +I+P V I  +S  +FY+
Sbjct: 236 LRRKTLFYTVNLIIPCVGISFLSVLVFYL 264


>AE014297-3553|AAF56301.2|  567|Drosophila melanogaster CG5610-PA
           protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 163 LKKRTFYYSKYIIMPYVTIKEISKFIFYI 77
           L+++T +Y+  +I+P V I  +S  +FY+
Sbjct: 236 LRRKTLFYTVNLIIPCVGISFLSVLVFYL 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,764,427
Number of Sequences: 53049
Number of extensions: 339544
Number of successful extensions: 840
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)