Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F08f
         (495 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       25   0.37 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.1  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.5  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 340 CPWLGRSRRCPDCPRDLASTTLTSTPKQGKSKA 242
           C  LG++  C  CP D   TTL+ +P + ++ +
Sbjct: 159 CQDLGKTFMCR-CPPDWEGTTLSQSPNRRRASS 190


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = -2

Query: 263 KTGEIEGLF*VFTEFNNLEFIHIFELLNSLHTTARITHRYTKISPRE 123
           K GE++ +   F+    L FI+++    S  TT+++ + Y +  PR+
Sbjct: 2   KPGELKRVLFFFSFCCILFFIYLYWQQTSNLTTSKLLYTYRQPYPRQ 48


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 316 FEISPTMGTTKPAPTDTN 369
           FE++ +   T P PTD N
Sbjct: 23  FEVNSSEQLTTPTPTDIN 40


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 218 NNLEFIHIFELLNSLH 171
           NN+   H F +LNS+H
Sbjct: 81  NNISDKHGFTILNSMH 96


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 265  PKQGKSKAFSKCSRNS 218
            PK G  + +S CS N+
Sbjct: 1268 PKMGGPQPYSACSENA 1283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,591
Number of Sequences: 336
Number of extensions: 2658
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)