Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F08f
         (495 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021278-1|AAX33426.1|  934|Drosophila melanogaster RE42943p pro...   127   9e-30
AY069146-1|AAL39291.1|  354|Drosophila melanogaster GH16587p pro...   127   9e-30
AF082097-1|AAC78847.1|  934|Drosophila melanogaster C1-THF synth...   127   9e-30
AE014297-1172|AAN13479.1|  934|Drosophila melanogaster CG4067-PC...   127   9e-30
AE014297-1171|AAN13478.1|  934|Drosophila melanogaster CG4067-PA...   127   9e-30
AE014297-1168|AAX52944.1|  968|Drosophila melanogaster CG4067-PD...   127   9e-30
AE014297-1167|AAG22140.2|  968|Drosophila melanogaster CG4067-PB...   127   9e-30
AY069830-1|AAL39975.1| 1218|Drosophila melanogaster SD07723p pro...    28   6.0  
AE013599-1765|AAF58335.2| 1218|Drosophila melanogaster CG12295-P...    28   6.0  

>BT021278-1|AAX33426.1|  934|Drosophila melanogaster RE42943p protein.
          Length = 934

 Score =  127 bits (306), Expect = 9e-30
 Identities = 56/83 (67%), Positives = 66/83 (79%)
 Frame = -2

Query: 485  TEKGYDKFPICMAKTSNSLTGDPAIKGAPTDFTLKINGIFVSVGAGFVVPMVGEISKMPG 306
            T+ G+   PICM+K S S TGD  IKGAP  FTL +  ++VS GAGFVV M GE++KMPG
Sbjct: 852  TDAGFGNLPICMSKVSGSFTGDAKIKGAPKGFTLDVEDVYVSAGAGFVVAMCGEVTKMPG 911

Query: 305  LPTRPSIYDIDLNTKTGEIEGLF 237
            LPTRP+IYDIDLNT+TGEIEGLF
Sbjct: 912  LPTRPAIYDIDLNTETGEIEGLF 934


>AY069146-1|AAL39291.1|  354|Drosophila melanogaster GH16587p
           protein.
          Length = 354

 Score =  127 bits (306), Expect = 9e-30
 Identities = 56/83 (67%), Positives = 66/83 (79%)
 Frame = -2

Query: 485 TEKGYDKFPICMAKTSNSLTGDPAIKGAPTDFTLKINGIFVSVGAGFVVPMVGEISKMPG 306
           T+ G+   PICM+K S S TGD  IKGAP  FTL +  ++VS GAGFVV M GE++KMPG
Sbjct: 272 TDAGFGNLPICMSKVSGSFTGDAKIKGAPKGFTLDVEDVYVSAGAGFVVAMCGEVTKMPG 331

Query: 305 LPTRPSIYDIDLNTKTGEIEGLF 237
           LPTRP+IYDIDLNT+TGEIEGLF
Sbjct: 332 LPTRPAIYDIDLNTETGEIEGLF 354


>AF082097-1|AAC78847.1|  934|Drosophila melanogaster C1-THF synthase
            homolog protein.
          Length = 934

 Score =  127 bits (306), Expect = 9e-30
 Identities = 56/83 (67%), Positives = 66/83 (79%)
 Frame = -2

Query: 485  TEKGYDKFPICMAKTSNSLTGDPAIKGAPTDFTLKINGIFVSVGAGFVVPMVGEISKMPG 306
            T+ G+   PICM+K S S TGD  IKGAP  FTL +  ++VS GAGFVV M GE++KMPG
Sbjct: 852  TDAGFGNLPICMSKVSGSFTGDAKIKGAPKGFTLDVEDVYVSAGAGFVVAMCGEVTKMPG 911

Query: 305  LPTRPSIYDIDLNTKTGEIEGLF 237
            LPTRP+IYDIDLNT+TGEIEGLF
Sbjct: 912  LPTRPAIYDIDLNTETGEIEGLF 934


>AE014297-1172|AAN13479.1|  934|Drosophila melanogaster CG4067-PC,
            isoform C protein.
          Length = 934

 Score =  127 bits (306), Expect = 9e-30
 Identities = 56/83 (67%), Positives = 66/83 (79%)
 Frame = -2

Query: 485  TEKGYDKFPICMAKTSNSLTGDPAIKGAPTDFTLKINGIFVSVGAGFVVPMVGEISKMPG 306
            T+ G+   PICM+K S S TGD  IKGAP  FTL +  ++VS GAGFVV M GE++KMPG
Sbjct: 852  TDAGFGNLPICMSKVSGSFTGDAKIKGAPKGFTLDVEDVYVSAGAGFVVAMCGEVTKMPG 911

Query: 305  LPTRPSIYDIDLNTKTGEIEGLF 237
            LPTRP+IYDIDLNT+TGEIEGLF
Sbjct: 912  LPTRPAIYDIDLNTETGEIEGLF 934


>AE014297-1171|AAN13478.1|  934|Drosophila melanogaster CG4067-PA,
            isoform A protein.
          Length = 934

 Score =  127 bits (306), Expect = 9e-30
 Identities = 56/83 (67%), Positives = 66/83 (79%)
 Frame = -2

Query: 485  TEKGYDKFPICMAKTSNSLTGDPAIKGAPTDFTLKINGIFVSVGAGFVVPMVGEISKMPG 306
            T+ G+   PICM+K S S TGD  IKGAP  FTL +  ++VS GAGFVV M GE++KMPG
Sbjct: 852  TDAGFGNLPICMSKVSGSFTGDAKIKGAPKGFTLDVEDVYVSAGAGFVVAMCGEVTKMPG 911

Query: 305  LPTRPSIYDIDLNTKTGEIEGLF 237
            LPTRP+IYDIDLNT+TGEIEGLF
Sbjct: 912  LPTRPAIYDIDLNTETGEIEGLF 934


>AE014297-1168|AAX52944.1|  968|Drosophila melanogaster CG4067-PD,
            isoform D protein.
          Length = 968

 Score =  127 bits (306), Expect = 9e-30
 Identities = 56/83 (67%), Positives = 66/83 (79%)
 Frame = -2

Query: 485  TEKGYDKFPICMAKTSNSLTGDPAIKGAPTDFTLKINGIFVSVGAGFVVPMVGEISKMPG 306
            T+ G+   PICM+K S S TGD  IKGAP  FTL +  ++VS GAGFVV M GE++KMPG
Sbjct: 886  TDAGFGNLPICMSKVSGSFTGDAKIKGAPKGFTLDVEDVYVSAGAGFVVAMCGEVTKMPG 945

Query: 305  LPTRPSIYDIDLNTKTGEIEGLF 237
            LPTRP+IYDIDLNT+TGEIEGLF
Sbjct: 946  LPTRPAIYDIDLNTETGEIEGLF 968


>AE014297-1167|AAG22140.2|  968|Drosophila melanogaster CG4067-PB,
            isoform B protein.
          Length = 968

 Score =  127 bits (306), Expect = 9e-30
 Identities = 56/83 (67%), Positives = 66/83 (79%)
 Frame = -2

Query: 485  TEKGYDKFPICMAKTSNSLTGDPAIKGAPTDFTLKINGIFVSVGAGFVVPMVGEISKMPG 306
            T+ G+   PICM+K S S TGD  IKGAP  FTL +  ++VS GAGFVV M GE++KMPG
Sbjct: 886  TDAGFGNLPICMSKVSGSFTGDAKIKGAPKGFTLDVEDVYVSAGAGFVVAMCGEVTKMPG 945

Query: 305  LPTRPSIYDIDLNTKTGEIEGLF 237
            LPTRP+IYDIDLNT+TGEIEGLF
Sbjct: 946  LPTRPAIYDIDLNTETGEIEGLF 968


>AY069830-1|AAL39975.1| 1218|Drosophila melanogaster SD07723p
           protein.
          Length = 1218

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 298 VGSPGIFEISPTMGTTKPAPTDTNIPLIFSVKSVGAPL 411
           +G P I+ + P +   +P P   N P+ FSV SV  P+
Sbjct: 152 IGEPLIY-VQPKVVVLEPRPEFHNTPVNFSVSSVHVPV 188


>AE013599-1765|AAF58335.2| 1218|Drosophila melanogaster CG12295-PB
           protein.
          Length = 1218

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 298 VGSPGIFEISPTMGTTKPAPTDTNIPLIFSVKSVGAPL 411
           +G P I+ + P +   +P P   N P+ FSV SV  P+
Sbjct: 152 IGEPLIY-VQPKVVVLEPRPEFHNTPVNFSVSSVHVPV 188


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,281,902
Number of Sequences: 53049
Number of extensions: 476836
Number of successful extensions: 1304
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)