Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306F08f
(495 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 5.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.2
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 21 7.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 9.5
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 9.5
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 9.5
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 9.5
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 9.5
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 9.5
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 9.5
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 9.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 9.5
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 9.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 9.5
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +2
Query: 398 WELP*WRDHRLRSSKSWPCKSEICRIPF 481
W W DH L+ + S + R+P+
Sbjct: 57 WVTQIWTDHHLKWNASEFAGIRVIRVPY 84
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 7.2
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -3
Query: 334 WLGRSRRCPDCPRDLASTTLTSTPKQGKSKAFSKCS 227
W+G R DL + L G S A S CS
Sbjct: 485 WIGAGRDSDSRLLDLCTKFLMHKDSLGLSTATSTCS 520
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 21.0 bits (42), Expect = 7.2
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -3
Query: 232 CSRNSIILNLYIF 194
CSRNS++ ++Y +
Sbjct: 46 CSRNSLMTHIYTY 58
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 69 DRRERGRSREHRIIPSH 85
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 69 DRRERGRSREHRIIPSH 85
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 69 DRRERGRSREHRIIPSH 85
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 69 DRRERGRSREHRIIPSH 85
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 69 DRRERGRSREHRIIPSH 85
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 69 DRRERGRSREHRIIPSH 85
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 69 DRRERGRSREHRIIPSH 85
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 298 RDLASTTLTSTPKQGKSKA 242
+D TLT+ PK K+K+
Sbjct: 207 KDGIPVTLTTVPKHSKTKS 225
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 318 DRRERGRSREHRIIPSH 334
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 318 DRRERGRSREHRIIPSH 334
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 318 DRRERGRSREHRIIPSH 334
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 318 DRRERGRSREHRIIPSH 334
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 318 DRRERGRSREHRIIPSH 334
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 318 DRRERGRSREHRIIPSH 334
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 317 DRRGRGRSREHRIIPSH 333
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 302 DRRERGRSREHRIIPSH 318
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 285 DARSRGQSGHLRDLPNH 335
D R RG+S R +P+H
Sbjct: 318 DRRERGRSREHRIIPSH 334
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,387
Number of Sequences: 438
Number of extensions: 3402
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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