Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F07f
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    26   0.21 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.84 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   2.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   4.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.8  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 155 CFFFITINIKNIHIFYKYKAEIIYLRNIL 69
           C F ITINI+   + Y +  +  +LR +L
Sbjct: 34  CLFPITINIRKNGLNYNFTKKCYFLRMVL 62


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -1

Query: 146 FITINIKNIHIFYKYKAEIIYLRNILRIEIVFYFF 42
           F  + I  + I+Y Y A I++  ++L +  ++YF+
Sbjct: 228 FYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFY 262



 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 167 HLDFC-FFFITINIKNIHIFYKYKAEIIYLRNILRIEIVFYF 45
           H   C ++F    I  + ++Y Y A II+  ++L +  ++YF
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136



 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = -1

Query: 152 FFFITINIKNIHIFYKYKAEIIYLRNILRIEIVFYFF 42
           ++F+      + I+Y Y A II+  ++L +  +++FF
Sbjct: 134 YYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFF 170


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 303 VHPHRYRLPTSV 338
           VHPHR+RL  ++
Sbjct: 100 VHPHRFRLKFNI 111


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 23  LSILFVQKNKIRFLSEVYY 79
           L ++FVQ   ++ LS+++Y
Sbjct: 200 LVLVFVQMQSVQDLSDIFY 218


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 287 THNTVGPPASVPPTHFC 337
           +HNT G P + P +  C
Sbjct: 286 SHNTRGTPRTTPASSRC 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,188
Number of Sequences: 336
Number of extensions: 2470
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)