Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F07f
         (479 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40419-5|AAA81426.1|  165|Caenorhabditis elegans Hypothetical pr...    31   0.33 
Z71265-5|CAA95836.1|  481|Caenorhabditis elegans Hypothetical pr...    31   0.57 
AL021469-3|CAA16290.2|  435|Caenorhabditis elegans Hypothetical ...    30   1.00 
U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z82073-5|CAB63322.1|  333|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U53150-8|AAA96128.2|  378|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>U40419-5|AAA81426.1|  165|Caenorhabditis elegans Hypothetical
           protein C27F2.6 protein.
          Length = 165

 Score = 31.5 bits (68), Expect = 0.33
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -1

Query: 158 FCFFFITINIKNIHIFYKYKAEIIYLRNILRIEIV 54
           +C FF+  ++ + HIFY ++A + Y  +IL  +I+
Sbjct: 78  YCLFFLISDVLSNHIFYFFQARVRYFFHILARKIL 112


>Z71265-5|CAA95836.1|  481|Caenorhabditis elegans Hypothetical
           protein M05B5.6 protein.
          Length = 481

 Score = 30.7 bits (66), Expect = 0.57
 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
 Frame = -1

Query: 251 WRRAYSAPDGKRRRLKRSISVIHQANYEHLDFCFFFITINIKNIHIFYKYKAEIIYLRNI 72
           W+       GK+  + R   +++  N + +D C FF +++I    +F+   A  ++ RN+
Sbjct: 58  WKELRKLKSGKKWGVIRHPYILNYVNQKLID-CAFFYSLHILAFLVFFLLLAWHVFSRNL 116

Query: 71  LR--IEIVF--YFFAQIKLKGRV 15
            +  +  +F   FF  + LKG +
Sbjct: 117 FKDFLITIFTGIFFMFLVLKGTI 139


>AL021469-3|CAA16290.2|  435|Caenorhabditis elegans Hypothetical
           protein Y116A8B.5 protein.
          Length = 435

 Score = 29.9 bits (64), Expect = 1.00
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -1

Query: 350 TLYTYRSG*AVPMRVDLLYYEFILNLMTE*HRAWR--RAYSAPDGKRRRLKR 201
           TLYT+  G A P  + +++Y  ++  + +  R  R  R  S PDG   R+K+
Sbjct: 217 TLYTFVIGFAAPAFLIIIFYVQVIYALQKSSRNIRGARGISKPDGSSNRVKK 268


>U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical
           protein C24A8.1 protein.
          Length = 582

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +2

Query: 2   ENEKIHVLSILFVQKNKIRFLSEVYYE-DR*SLPYIYRIYVY 124
           E++K+H L    V+K K+R LSE+  + +R S   I  +Y+Y
Sbjct: 355 ESKKLHSLKPPLVEKRKMRRLSEMISDWERPSRSSISNMYLY 396


>Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical
           protein Y26G10.2 protein.
          Length = 337

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +3

Query: 54  YDFYPKYITKIDNLCLIFIEYMYIFN----IYSYKKKTKI*VFIIRLM 185
           Y F P  IT+ID L + FI+   +F     +YS    + + +F  R++
Sbjct: 77  YTFVPSKITRIDGLLIDFIDINTLFTSMYVVYSLASSSCLLLFCNRIL 124


>Z82073-5|CAB63322.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.7 protein.
          Length = 333

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +3

Query: 33  YLCKKIKYDFY---PKYITKIDNLCLIFIEYMYIF 128
           +LC  +  DFY   P  IT+ID L + FI+   ++
Sbjct: 61  WLCSFLLIDFYTFVPSKITRIDGLLIDFIDAKVLY 95


>U53150-8|AAA96128.2|  378|Caenorhabditis elegans Hypothetical
           protein F20A1.2 protein.
          Length = 378

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -1

Query: 215 RRLKRSISVIHQANYEHLD--FCFFFITINIKNIHIFYKYKAEIIYL 81
           R+L  S   ++ A    LD   CFFF+ I + ++++ Y  K+E ++L
Sbjct: 46  RQLANSPPQLYPAILAFLDTLLCFFFLMIFVVDVNMIYN-KSEYLFL 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,646,358
Number of Sequences: 27780
Number of extensions: 213529
Number of successful extensions: 461
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)