Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F07f
         (479 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   3.0  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   3.0  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   3.0  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   3.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   3.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   3.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   3.9  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   6.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.9  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 66  PKYITKIDNLCLIFIEYMYIFNIYSYKKK 152
           PK I+ + N  +    Y Y +N  +Y KK
Sbjct: 79  PKIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 66  PKYITKIDNLCLIFIEYMYIFNIYSYKKK 152
           PK I+ + N  +    Y Y +N  +Y KK
Sbjct: 79  PKIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 66  PKYITKIDNLCLIFIEYMYIFNIYSYKKK 152
           PK I+ + N  +    Y Y +N  +Y KK
Sbjct: 79  PKIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 66  PKYITKIDNLCLIFIEYMYIFNIYSYKKK 152
           PK I+ + N  +    Y Y +N  +Y KK
Sbjct: 79  PKIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 398 KLYVTL*RPSVPALHQMSWY 457
           K+Y  L R + PAL  ++WY
Sbjct: 39  KVYNLLYRVAQPALANITWY 58


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 398 KLYVTL*RPSVPALHQMSWY 457
           K+Y  L R + PAL  ++WY
Sbjct: 39  KVYNLLYRVAQPALANITWY 58


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 233 APDGKRRRLKRSISVIHQAN 174
           A DG RRR+ +  S I +AN
Sbjct: 431 AQDGLRRRMDKLKSSIEEAN 450


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 221 KRRRLKRSISVIHQANYEHLDFCFFFITINI 129
           +RRR  R  SV        + F  FF+ IN+
Sbjct: 410 RRRRTPRYNSVSKIDRASRIVFPLFFLAINV 440


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 299 VGPPASVPPTHFCMYKEW 352
           +G PA++  T  CM   W
Sbjct: 204 IGDPANIEFTELCMKLGW 221


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,688
Number of Sequences: 438
Number of extensions: 2568
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)