Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.71 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   8.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   8.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 247 TICSLWTACLVLKVTFYVICSLL 315
           T C+L TA +   +  +V+C LL
Sbjct: 405 TFCTLVTALVYCSLAIFVLCELL 427


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 324 RHSQKRANNVKRYFQ--DETGCPQ 259
           RH QKR +  +RYF+  DE   P+
Sbjct: 403 RHKQKRRDERERYFKGLDEEKLPE 426


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 509 RSEQRHLQQIAIGNEGHIPYSLYN 438
           R++++H QQ    N+   P  +YN
Sbjct: 295 RTDRKHTQQHYQMNQNMYPGEMYN 318


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 384 NSAGFYARSADYMDIVYGVIKGVWN 458
           NS G YA +  Y + +  ++   WN
Sbjct: 321 NSEGLYAINEIYDNALLALLDDYWN 345


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 384 NSAGFYARSADYMDIVYGVIKGVWN 458
           NS G YA +  Y + +  ++   WN
Sbjct: 321 NSEGLYAINEIYDNALLALLDDYWN 345


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 509 RSEQRHLQQIAIGNEGHIPYSLYN 438
           R++++H QQ    N+   P  +YN
Sbjct: 243 RTDRKHTQQHYQMNQNMYPGEMYN 266


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 509 RSEQRHLQQIAIGNEGHIPYSLYN 438
           R++++H QQ    N+   P  +YN
Sbjct: 426 RTDRKHTQQHYQMNQNMYPGEMYN 449


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,496
Number of Sequences: 336
Number of extensions: 2330
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)