Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306F03f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30242| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 2e-22
SB_53853| Best HMM Match : Glyco_transf_25 (HMM E-Value=4.8e-31) 56 2e-08
SB_48429| Best HMM Match : PI3_PI4_kinase (HMM E-Value=7.7e-09) 30 1.3
SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0) 29 1.8
SB_56291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.) 23 6.7
SB_29026| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_58065| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_30242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 102 bits (244), Expect = 2e-22
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 2/175 (1%)
Frame = +3
Query: 3 IEQATPFLEDFLDQVIDTDYPKNKIHLFIXXXXXXXXXXXXKFFGAYSKE-YASAKRINS 179
I + TPF+ +F ++ DYPK KI L+I ++ + Y S
Sbjct: 239 ISRPTPFVPEFFKRIEALDYPKKKIALYIHNLMDGHTKEVNEWLTEEIRGLYHSVTYQGP 298
Query: 180 GDFISEAEARNLAKERCINSACDYLFSVDS-LSRLESNVLRYLLSSGYDVIAPMLTRPGK 356
G F EA ARN A + I S DYLF VD+ + L+ L+ ++ P +++ K
Sbjct: 299 GTF--EAAARNKAVDVAIQSGSDYLFVVDANVVYTNKKSLKLLIEQNRPLLVPKMSKHAK 356
Query: 357 AWSNFWGALNSAGFYARSADYMDIVYGVIKGVWNVPFITNCYLLKMSLFRAPKAK 521
WSNFWG + G+YAR+ DY+DIV G+WN ++T YL++ + PK K
Sbjct: 357 LWSNFWGTIGDDGYYARAEDYIDIVEYRRVGIWNSAYVTGSYLIQKDVL--PKLK 409
>SB_53853| Best HMM Match : Glyco_transf_25 (HMM E-Value=4.8e-31)
Length = 534
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Frame = +3
Query: 198 AEARNLAKERCINSACDYLFSVDSLSRLESNV-LRYLLSSGYDVIAPMLTRPGK--AWSN 368
A R LA + DYLF VD + L + + LR L+ V++PML G A+SN
Sbjct: 58 AYLRQLALDTARYWWADYLFVVDCDNFLFNPITLRQLMHEEKTVVSPMLEVFGNKSAYSN 117
Query: 369 FWGALNSAGFYARSADYMDIVYGVIKGVWNVPFITNCYLLKM 494
FWG ++ +G+Y R+ Y I+ G + VP + + YL+ +
Sbjct: 118 FWGGMDESGYYKRTDQYFTILNREKVGTFEVPMVHSTYLVDL 159
>SB_48429| Best HMM Match : PI3_PI4_kinase (HMM E-Value=7.7e-09)
Length = 1423
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1
Query: 229 ASTVHATICSLWTACLVLKVTFYVICSLLAMTSSRRC*RVLAKPGPTSGELSTLLDFMRD 408
AS + +CSL CL+++ T V L+ +SR L + SG ++ LL +RD
Sbjct: 502 ASVITTALCSLSKRCLIMENTARVAGDRLSDLTSRDGDWFLEELCSMSGNVTQLLSLLRD 561
>SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1027
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 354 KAWSNFWGALNSAGFYARSADYMDIVYGVIKGVWNVPFITNCYLLKMSLFRA 509
++W G+ AG AR Y GV+ GVW VP +T C M +A
Sbjct: 876 RSWGVRSGSRAVAGGQARRGCYR----GVLGGVWGVPDMTQCITRAMQQLQA 923
>SB_56291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 426 CPYNLRISHKIQQS*ELPRSWTRLCQDA-LASAR*RHSQKRANNVKRYFQDETGCPQRTD 250
C Y + H++ + TR+ +D + + R +R N K+Y QD +G P
Sbjct: 196 CGYKGHVMHELMHALGFLHEQTRMDRDEHITVHKDRIFPERMLNFKKYHQDTSGLPYDFR 255
Query: 249 SRMH 238
S +H
Sbjct: 256 SLVH 259
>SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3889
Score = 23.4 bits (48), Expect(2) = 6.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 259 LWTACLVLKVTFYVICSLLAMTSSR 333
LW L+ VT++++ +LA S R
Sbjct: 219 LWPRILITVVTYFMLTIILATDSDR 243
Score = 22.2 bits (45), Expect(2) = 6.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 193 QKQKQETLQRKDASTVHATICSLWTAC 273
Q+Q T+Q K AS V T+ + T C
Sbjct: 171 QRQYSVTVQEKRASHVILTLTVMVTCC 197
>SB_29026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 661
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 126 KFFGAYSKEYASAKRINSGDFISEAEARNLAKERCINSACDYLF 257
K + KEY K N G RN +KE C++ A ++ F
Sbjct: 91 KHWNESRKEYIQKKTNNGGGSRECKLPRNASKEECMSKAKEFFF 134
>SB_58065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 364 PTSGELSTLLDFMRDPQIIWT*Y 432
P S L T+L +RDP +WT Y
Sbjct: 467 PDSPRLETILKGLRDPDKLWTDY 489
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 180 GDFISEAEARNLAKERCINSACDYLFSV 263
GDF+ + A+N+ +ER +A DY FS+
Sbjct: 636 GDFLGNSVAKNVLRERVYCNALDY-FSI 662
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,645,526
Number of Sequences: 59808
Number of extensions: 272009
Number of successful extensions: 703
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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