Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F03f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         28   0.17 
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   8.2  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
 Frame = +1

Query: 127  NFSEPTLKNMPQQNV*ILETSFQKQKQETLQRK-----DASTVHATICSLWTACLVLKVT 291
            NF  P   N     +       ++ K+E L++K     +  T+H    SLW A + L   
Sbjct: 1094 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTIHPFPASLWRAAVCLPCV 1153

Query: 292  FYVICSLLAMTSSRR 336
             Y I +LL     RR
Sbjct: 1154 LYRINALLLADEIRR 1168


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 389 CWILCEIRRLYGHSIWSYKG 448
           C++LC I     +S WS +G
Sbjct: 15  CFVLCVIHIRKKYSFWSERG 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,052
Number of Sequences: 2352
Number of extensions: 10644
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)