Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003764-1|AAO41443.1|  595|Drosophila melanogaster RE30068p pro...   130   8e-31
AE014296-1928|AAN11883.1|  721|Drosophila melanogaster CG6199-PB...   130   8e-31
AE014296-1927|AAF50079.1|  721|Drosophila melanogaster CG6199-PA...   130   8e-31
AE014134-928|AAN10543.1|  612|Drosophila melanogaster CG31915-PA...    42   5e-04

>BT003764-1|AAO41443.1|  595|Drosophila melanogaster RE30068p
           protein.
          Length = 595

 Score =  130 bits (315), Expect = 8e-31
 Identities = 65/170 (38%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
 Frame = +3

Query: 3   IEQATPFLEDFLDQVIDTDYPKNKIHLFIXXXXXXXXXXXXKFFGAYSKEYASAKRINSG 182
           + Q  PF + FL+ +   +YPK K+HL I             F   ++KEYA+AK   S 
Sbjct: 292 VTQPVPFFDQFLEGIESLNYPKEKLHLLIYSNVAFHDDDIKSFVNKHAKEYATAKFALST 351

Query: 183 DFISEAEARNLAKERCINSACDYLFSVDSLSRLESN-VLRYLLSSGYDVIAPMLTRPGKA 359
           D + E + R LA ++      DY+F VD+ + ++   VLR LL      +AP+ ++  + 
Sbjct: 352 DELDERQGRQLALDKARLHQSDYIFFVDADAHIDDGEVLRELLRLNKQFVAPIFSKHKEL 411

Query: 360 WSNFWGALNSAGFYARSADYMDIVYGVIKGVWNVPFITNCYLLKMSLFRA 509
           WSNFWGAL+  G+YARS DY+DIV   + G++NVP +T+ YL+K + F A
Sbjct: 412 WSNFWGALSEGGYYARSHDYVDIVKRELIGMFNVPHVTSIYLVKKTAFDA 461


>AE014296-1928|AAN11883.1|  721|Drosophila melanogaster CG6199-PB,
           isoform B protein.
          Length = 721

 Score =  130 bits (315), Expect = 8e-31
 Identities = 65/170 (38%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
 Frame = +3

Query: 3   IEQATPFLEDFLDQVIDTDYPKNKIHLFIXXXXXXXXXXXXKFFGAYSKEYASAKRINSG 182
           + Q  PF + FL+ +   +YPK K+HL I             F   ++KEYA+AK   S 
Sbjct: 292 VTQPVPFFDQFLEGIESLNYPKEKLHLLIYSNVAFHDDDIKSFVNKHAKEYATAKFALST 351

Query: 183 DFISEAEARNLAKERCINSACDYLFSVDSLSRLESN-VLRYLLSSGYDVIAPMLTRPGKA 359
           D + E + R LA ++      DY+F VD+ + ++   VLR LL      +AP+ ++  + 
Sbjct: 352 DELDERQGRQLALDKARLHQSDYIFFVDADAHIDDGEVLRELLRLNKQFVAPIFSKHKEL 411

Query: 360 WSNFWGALNSAGFYARSADYMDIVYGVIKGVWNVPFITNCYLLKMSLFRA 509
           WSNFWGAL+  G+YARS DY+DIV   + G++NVP +T+ YL+K + F A
Sbjct: 412 WSNFWGALSEGGYYARSHDYVDIVKRELIGMFNVPHVTSIYLVKKTAFDA 461


>AE014296-1927|AAF50079.1|  721|Drosophila melanogaster CG6199-PA,
           isoform A protein.
          Length = 721

 Score =  130 bits (315), Expect = 8e-31
 Identities = 65/170 (38%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
 Frame = +3

Query: 3   IEQATPFLEDFLDQVIDTDYPKNKIHLFIXXXXXXXXXXXXKFFGAYSKEYASAKRINSG 182
           + Q  PF + FL+ +   +YPK K+HL I             F   ++KEYA+AK   S 
Sbjct: 292 VTQPVPFFDQFLEGIESLNYPKEKLHLLIYSNVAFHDDDIKSFVNKHAKEYATAKFALST 351

Query: 183 DFISEAEARNLAKERCINSACDYLFSVDSLSRLESN-VLRYLLSSGYDVIAPMLTRPGKA 359
           D + E + R LA ++      DY+F VD+ + ++   VLR LL      +AP+ ++  + 
Sbjct: 352 DELDERQGRQLALDKARLHQSDYIFFVDADAHIDDGEVLRELLRLNKQFVAPIFSKHKEL 411

Query: 360 WSNFWGALNSAGFYARSADYMDIVYGVIKGVWNVPFITNCYLLKMSLFRA 509
           WSNFWGAL+  G+YARS DY+DIV   + G++NVP +T+ YL+K + F A
Sbjct: 412 WSNFWGALSEGGYYARSHDYVDIVKRELIGMFNVPHVTSIYLVKKTAFDA 461


>AE014134-928|AAN10543.1|  612|Drosophila melanogaster CG31915-PA
           protein.
          Length = 612

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
 Frame = +3

Query: 246 DYLFSVDSLSRLES-NVLRYLLSSGYDVIAPMLTRPGKAWSNFWGALNSAGFYARSADYM 422
           DY+F +D+   L S + L+ L      ++APML      +SNFW  +    +Y R+ +Y 
Sbjct: 138 DYVFFLDADVLLTSKDSLKVLTRLQLPIVAPMLISES-LYSNFWCGMTEDYYYRRTDEYK 196

Query: 423 DIVYGVIKGVWNVPFITNCYLLKMS 497
           +I +   +G + VP +    L+ M+
Sbjct: 197 EIYHVKKQGSFPVPMVHTAVLVNMN 221


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,011,725
Number of Sequences: 53049
Number of extensions: 392617
Number of successful extensions: 1186
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)