Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F03f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66512-7|CAA91321.1|  730|Caenorhabditis elegans Hypothetical pr...   114   4e-26
AL021480-1|CAA16326.1|  133|Caenorhabditis elegans Hypothetical ...    30   0.87 
Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z68012-2|CAA92020.1|  408|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF016436-2|AAC25898.1|  406|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z49127-5|CAA88945.1|  421|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U56963-5|AAB38122.3|  323|Caenorhabditis elegans Serpentine rece...    27   8.1  
AL021447-5|CAA16268.4|  312|Caenorhabditis elegans Hypothetical ...    27   8.1  
AC006625-4|AAK68276.1|  446|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z66512-7|CAA91321.1|  730|Caenorhabditis elegans Hypothetical
           protein F52H3.1 protein.
          Length = 730

 Score =  114 bits (274), Expect = 4e-26
 Identities = 68/176 (38%), Positives = 94/176 (53%), Gaps = 5/176 (2%)
 Frame = +3

Query: 3   IEQATPFLEDFLDQVIDTDYPKNKIHLFIXXXXXXXXXXXXKFFGAYSKEYASAKRINSG 182
           I +  PF+E+ L ++ + DYPK KI L+I             F   + K Y + + IN  
Sbjct: 290 ISKPIPFIEEVLQKIAEFDYPKEKIALYIYNNQPFSIKNIQDFLQKHGKSYYTKRVINGV 349

Query: 183 DFISEAEARNLAKERCINSACDYLFSVDSLSRL-ESNVLRYLL--SSGYDV--IAPMLTR 347
             I + EARN A E       ++ F +D  +   E  V++ L+  S  YDV  IAPM+ +
Sbjct: 350 TEIGDREARNEAIEWNKARNVEFAFLMDGDAYFSEPKVIKDLIQYSKTYDVGIIAPMIGQ 409

Query: 348 PGKAWSNFWGALNSAGFYARSADYMDIVYGVIKGVWNVPFITNCYLLKMSLFRAPK 515
           PGK ++NFWGA+ + G+YARS DYM IV G   G WNVPFIT+  L       A K
Sbjct: 410 PGKLFTNFWGAIAANGYYARSEDYMAIVKGNRVGYWNVPFITSAVLFNKEKLEAMK 465


>AL021480-1|CAA16326.1|  133|Caenorhabditis elegans Hypothetical
           protein Y39E4A.1 protein.
          Length = 133

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 145 LKNMPQQNV*ILETSFQKQKQETLQRK--DASTVHATICSLWTACLVLKVTFY 297
           ++ +P+ +   ++    K K + L+ K  +A  V+ T+  +WT CLVL V  Y
Sbjct: 75  VQELPESDPSSIKPRVNKAKIKKLKNKLKNAKIVYWTMLGIWTICLVLFVLVY 127


>Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical
           protein F13H10.4c protein.
          Length = 792

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +1

Query: 379 LSTLLDFMRDPQIIWT*Y 432
           L ++LD +RDP+I+WT Y
Sbjct: 662 LKSMLDKIRDPKILWTNY 679


>Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical
           protein F13H10.4b protein.
          Length = 789

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +1

Query: 379 LSTLLDFMRDPQIIWT*Y 432
           L ++LD +RDP+I+WT Y
Sbjct: 659 LKSMLDKIRDPKILWTNY 676


>Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical
           protein F13H10.4a protein.
          Length = 796

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +1

Query: 379 LSTLLDFMRDPQIIWT*Y 432
           L ++LD +RDP+I+WT Y
Sbjct: 666 LKSMLDKIRDPKILWTNY 683


>Z68012-2|CAA92020.1|  408|Caenorhabditis elegans Hypothetical
           protein T24D5.2 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 103 NITRMRWRNFSEPTLKNMPQQNV*ILETSFQKQKQETLQRKDASTVHATI 252
           N T  R RN +   L+NM  QN+ + ++ F   + + +   D S   +TI
Sbjct: 170 NNTLFRNRNMAIEELRNMLSQNIRVYKSLFVTNRSQQMGEMDLSKCVSTI 219


>AF016436-2|AAC25898.1|  406|Caenorhabditis elegans Hypothetical
           protein F38H12.3 protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 464 GHIPYSLYNSIYYVHIICGSRIKSSRVESSPEVGP 360
           GH+ Y     + Y+H  C S +    ++ SP+ GP
Sbjct: 330 GHVTYK---DLQYLHNKCMSELMDHSIQRSPDAGP 361


>Z49127-5|CAA88945.1|  421|Caenorhabditis elegans Hypothetical
           protein F13D12.5 protein.
          Length = 421

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 171 INSGDFISEAEARNLAKERCINSACDYLFSVDSLSRLESNV 293
           I + D+    + +N  KE C N   DYL + ++ S  +SNV
Sbjct: 307 IRANDYCMLRDGKNYNKESCENEQADYL-ARNNPSETDSNV 346


>U56963-5|AAB38122.3|  323|Caenorhabditis elegans Serpentine
           receptor, class v protein30 protein.
          Length = 323

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -1

Query: 491 LQQIAIGNEGHIPYSLYNSIYY-VHIIC 411
           +++I   NE  +  +LYNSIYY ++I C
Sbjct: 74  IREILYSNEHFVAATLYNSIYYTLYIRC 101


>AL021447-5|CAA16268.4|  312|Caenorhabditis elegans Hypothetical
           protein F19B2.3 protein.
          Length = 312

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +3

Query: 309 SSGYDVIAPMLTRPGKAWSNFWGALNSAGFYARSADYMDIVYGVIKGVWNVPFITNCYL 485
           S   D + P   R G AW  F   +NS   Y    D++    G+   +++   +T  Y+
Sbjct: 4   SKATDYVVPEEFR-GDAWLKFSSWINSISAYLYLTDFIISFIGIFPSLFHFWILTRTYM 61


>AC006625-4|AAK68276.1|  446|Caenorhabditis elegans Hypothetical
           protein C55B7.5 protein.
          Length = 446

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 343 RVLAKPGPTSGELSTLLDFM 402
           R+LA+PG T  E+  LLDF+
Sbjct: 241 RLLAQPGVTQKEMERLLDFL 260


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,916,243
Number of Sequences: 27780
Number of extensions: 207021
Number of successful extensions: 579
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)