Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    24   0.94 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   5.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   5.0  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   5.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   5.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   5.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   5.0  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   5.0  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 224 FNWNDICHTSLCLTTIQTMVAILRCAILHSVPN 322
           F W  +  +S   T+  T   I+RCA+    PN
Sbjct: 83  FAWGSLXRSSSPQTSAPTGPPIVRCALRKHKPN 115


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 519 SSDIRSRYRPV*GNMHPKKSHQPWRELSVAQKS 421
           + D   +Y PV  NM  +  H+PW      Q++
Sbjct: 438 NGDYIRKYLPVLKNMPSQYIHEPWTAPEQVQRA 470


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 215 CQRHQTFYSSHC 180
           CQ H T Y+ HC
Sbjct: 76  CQDHTTHYTCHC 87


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 FVILACALPQYKLWWPFFVVLFYILC 317
           F+IL C    Y  +  F V L ++LC
Sbjct: 107 FIILLCVYYFYYAFIIFTVHLLFLLC 132


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 230 WNDICHTSLCLTTIQTMVAILRC 298
           +ND+  T L L T +++V +L C
Sbjct: 235 FNDVFGTCLILITGKSIVQLLTC 257


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 230 WNDICHTSLCLTTIQTMVAILRC 298
           +ND+  T L L T +++V +L C
Sbjct: 235 FNDVFGTCLILITGKSIVQLLTC 257


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +3

Query: 249 LACALPQYKLWW 284
           +A  +P+Y+ WW
Sbjct: 266 IALTVPRYQAWW 277


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +3

Query: 249 LACALPQYKLWW 284
           +A  +P+Y+ WW
Sbjct: 266 IALTVPRYQAWW 277


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +3

Query: 249 LACALPQYKLWW 284
           +A  +P+Y+ WW
Sbjct: 266 IALTVPRYQAWW 277


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +3

Query: 249 LACALPQYKLWW 284
           +A  +P+Y+ WW
Sbjct: 266 IALTVPRYQAWW 277


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +3

Query: 249 LACALPQYKLWW 284
           +A  +P+Y+ WW
Sbjct: 266 IALTVPRYQAWW 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,698
Number of Sequences: 336
Number of extensions: 2652
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)