Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306F02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23450-3|AAN39678.1| 132|Caenorhabditis elegans Hypothetical pr... 132 2e-31
U23450-4|AAN39679.1| 130|Caenorhabditis elegans Hypothetical pr... 125 2e-29
AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical ... 31 0.66
AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical ... 29 2.7
Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical pr... 28 3.5
AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical ... 28 3.5
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 27 6.2
AC024755-5|AAK84601.1| 153|Caenorhabditis elegans Hypothetical ... 27 6.2
>U23450-3|AAN39678.1| 132|Caenorhabditis elegans Hypothetical
protein C30B5.2a protein.
Length = 132
Score = 132 bits (318), Expect = 2e-31
Identities = 59/113 (52%), Positives = 83/113 (73%)
Frame = +3
Query: 183 MAGIKGLVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAG 362
M G++ + +LAFAG +G+TF++L CALP+Y W P FV+ FY+L P+P +IARR +
Sbjct: 1 MGGVRAVAALAFAGVVGLTFLVLGCALPRYGTWTPMFVITFYVLSPVPLLIARRFQEDMT 60
Query: 363 GSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTI 521
G+N AC+E A+FIT G ++S+FALPIVLA AG I AC+L G+VI++ TI
Sbjct: 61 GTN-ACIELALFITTGIVISAFALPIVLAHAGTIANSACFLVNTGSVIMFGTI 112
>U23450-4|AAN39679.1| 130|Caenorhabditis elegans Hypothetical
protein C30B5.2b protein.
Length = 130
Score = 125 bits (301), Expect = 2e-29
Identities = 58/113 (51%), Positives = 82/113 (72%)
Frame = +3
Query: 183 MAGIKGLVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAG 362
M G++ + +LAFAG +G+TF++L CALP + W P FV+ FY+L P+P +IARR +
Sbjct: 1 MGGVRAVAALAFAGVVGLTFLVLGCALP--RTWTPMFVITFYVLSPVPLLIARRFQEDMT 58
Query: 363 GSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTI 521
G+N AC+E A+FIT G ++S+FALPIVLA AG I AC+L G+VI++ TI
Sbjct: 59 GTN-ACIELALFITTGIVISAFALPIVLAHAGTIANSACFLVNTGSVIMFGTI 110
>AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical
protein Y73E7A.3 protein.
Length = 429
Score = 30.7 bits (66), Expect = 0.66
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 101 YYLLAEVYFISGVFKQEENNYT*NIKHNGWNKRFGVVGIRGFNWNDICHTSLCLTTIQTM 280
Y+LL VY IS K +EN ++ GW R+ ++ I N + + T + T
Sbjct: 100 YFLLCFVYCISLACKNDENGLVVVLRKRGW--RYLILAIIDVEANYMIVKAYQYTNL-TS 156
Query: 281 VAILRCAILHSV 316
V +L CA + +V
Sbjct: 157 VQLLDCATIPTV 168
>AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical
protein F52G3.4 protein.
Length = 1009
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 356 CWRFKFRLYGNCSIYHNGIFSQLFC 430
C+R++ RLY C H+G +L+C
Sbjct: 736 CYRYQDRLYYVCRFQHHGSIIELWC 760
>Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical
protein F17C8.1 protein.
Length = 1253
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 201 LVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAGGSNSAC 380
+VSL I F ACA + + P + +++C + +I A + A
Sbjct: 96 IVSLCLCAIIFAMFAFTACAAQYQRFYMPTSFLCTFLICLVTLLIFSAENQAAFMTPVAS 155
Query: 381 METAVFITMGFLVSSFALPIVLA-RAGVIF 467
+ T+ + + + + LP+ L G+I+
Sbjct: 156 LATSFQVVL-LIYTVIPLPLYLCILIGIIY 184
>AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical
protein Y50D7A.1 protein.
Length = 791
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 345 HTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGN 500
HT GA ++ ++TA ++SS P + A ++ WG + GN
Sbjct: 163 HTPGAVFNDLWRLDTATLKWSRVIISSAPYPSAMCYASLVTWGTQLILFGGN 214
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -2
Query: 508 TITLPASVR*HAPQKITPALARTIGSAKELTKNPIVINTAVSIQA 374
T+T+P++ + P+ +PA R+ S++E+T P V A ++A
Sbjct: 50 TLTMPSTSQDIQPES-SPAHGRSAPSSQEITSPPTVRRVATPLEA 93
>AC024755-5|AAK84601.1| 153|Caenorhabditis elegans Hypothetical
protein Y34B4A.5 protein.
Length = 153
Score = 27.5 bits (58), Expect = 6.2
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +2
Query: 194 KRFGVV---GIRGFNWNDICHTSLCLTTIQTMVAILRCAILHSVPNTYDDR*EAY*WCWR 364
K+FG G GF+ ND+C +++ +T QT ++ R ++ Y + C
Sbjct: 54 KQFGFACGAGFEGFSNNDVCMSNI-FSTKQTQISDCRATFAKNLLADYKNH------C-- 104
Query: 365 FKFRLYGNCSIYHNGIFSQLFCATDSSRQGWCDF 466
F Y C N +F C ++SS G C++
Sbjct: 105 MYFEQYTGC---FNALFDHSSCNSESSWWG-CEY 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,114,641
Number of Sequences: 27780
Number of extensions: 249280
Number of successful extensions: 543
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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