Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   1.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   5.0  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   6.6  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 253 KFVIPDPNLAYNAAYISVIAASTPIAKSH 167
           K ++ DPN    +A  SVI   +PI   H
Sbjct: 333 KELVADPNQHVKSALASVIMGLSPILGRH 361


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 334 NRIFGIRLLSVHIF 293
           NRIFG  +L  HIF
Sbjct: 152 NRIFGWNILFGHIF 165


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 210 YAALYARFG 236
           YAA YARFG
Sbjct: 67  YAATYARFG 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,597
Number of Sequences: 336
Number of extensions: 2972
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)