Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306F01f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489... 32 0.32
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890... 30 0.98
12_02_1210 + 27021592-27021616,27021835-27022256 30 1.3
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 30 1.3
01_06_1793 - 39916024-39916824 30 1.3
11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357 29 1.7
02_02_0620 + 12210812-12210997,12212397-12212474,12212744-122128... 29 1.7
04_04_1512 - 34100660-34100768,34101732-34102268,34102376-341026... 29 2.3
10_08_0243 - 16124790-16125361,16126358-16126547 29 3.0
07_03_0866 - 22134215-22135351 28 4.0
06_01_1161 - 9872947-9873800,9874187-9874331,9874628-9874681 28 4.0
01_06_1794 - 39919363-39920025 28 4.0
08_02_0648 - 19694538-19696569,19697151-19697998 28 5.2
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881 28 5.2
06_01_0048 + 436156-436406,436514-436693,436725-437133 28 5.2
10_08_0241 - 16111792-16112367 27 6.9
10_08_0216 - 15942379-15942852,15942956-15943033 27 6.9
06_03_0500 + 21470681-21470952,21471049-21471089,21472322-214724... 27 6.9
06_01_0690 + 5033943-5034740 27 6.9
04_03_0331 + 14510848-14511124,14511139-14511528,14511708-145119... 27 6.9
10_08_0898 + 21424379-21424792,21424974-21425723 27 9.1
10_08_0223 - 15986763-15987575 27 9.1
10_08_0218 - 15967064-15967906 27 9.1
10_08_0196 + 15656385-15656400,15657425-15657797,15659096-15659363 27 9.1
08_02_0729 + 20466352-20466506,20468137-20468395,20469368-204695... 27 9.1
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 27 9.1
>06_03_1450 +
30246702-30247346,30248603-30248689,30248789-30248920,
30249016-30249162,30250375-30250440,30250519-30250629,
30251551-30251584,30251667-30251743,30251829-30251906
Length = 458
Score = 31.9 bits (69), Expect = 0.32
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +1
Query: 235 GRGSQT-YGPTNNGYGFSASQIYGQTGGGS---QIYGYTGEYPRAHYP 366
G GSQ Y P G G+S +Y +GGG + YG G PR++ P
Sbjct: 99 GSGSQELYPPKPAGGGWSDDGVYAYSGGGGDAPEPYGARGTAPRSNSP 146
>06_01_1087 +
8901950-8902102,8902960-8903996,8904438-8904586,
8905437-8905690,8905785-8908799,8908889-8909001,
8909975-8910164,8910399-8910512,8910591-8910698,
8910941-8911073,8911206-8911408,8911626-8911826
Length = 1889
Score = 30.3 bits (65), Expect = 0.98
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -2
Query: 265 SLDHKFVIPDPNLAYNAAYISVIAASTPIAKSHQGSGMLIAQ*KQL---TYAFLMEDKVS 95
SL + ++ + + A+N A IS A+S + S GSG +IA + L T++ L ++K
Sbjct: 306 SLQRRNLVHEQSYAHNTADISRSASSYVSSSSKSGSGSVIASREHLTEDTFSQLRQEKTQ 365
Query: 94 PVLLT 80
LT
Sbjct: 366 EPSLT 370
>12_02_1210 + 27021592-27021616,27021835-27022256
Length = 148
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Frame = +1
Query: 241 GSQTYGPTNNGYGFSASQ------IYGQTGGGSQIYGYTG 342
G+Q + P ++GYG +A YG GGG YGY G
Sbjct: 75 GNQAFFPGSSGYGTAAGLGAGGFGPYGGYGGGPGTYGYNG 114
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 350 GYSPV*PYIWDPPPVCP 300
G P P +W PPPVCP
Sbjct: 235 GIRPWPPQVWPPPPVCP 251
>01_06_1793 - 39916024-39916824
Length = 266
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 253 YGPTNNGYGFSASQIYGQTGG-GSQIYGYTGEYPRAHY 363
Y P NNG G+ YG GG G YG G Y + Y
Sbjct: 131 YNPYNNGGGYGGPS-YGNGGGYGGSTYGNGGGYGGSSY 167
>11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357
Length = 481
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +1
Query: 220 YTPDSGRGS-QTYGPTNNGYG--FSASQIYGQTGGGSQIYGYT 339
Y ++G G T+ + NGYG F S G GGG IYG T
Sbjct: 402 YGRNAGSGVVNTFNQSTNGYGRNFGDSSGGGGGGGGGSIYGDT 444
>02_02_0620 +
12210812-12210997,12212397-12212474,12212744-12212848,
12212998-12213022,12213214-12213266,12213523-12213635,
12213777-12213801,12214560-12214601,12214666-12214726,
12216027-12216043,12217143-12217257,12217431-12218659
Length = 682
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -1
Query: 503 IQCELKQI*TY*NQDFKGILSKFCQVSVSNISKEI*KLL 387
I+C++K +Q+ KG+ SKF +V SN+ + + LL
Sbjct: 448 IRCDIKVFKEIYSQETKGVHSKFVEVPPSNLHQHLGNLL 486
>04_04_1512 -
34100660-34100768,34101732-34102268,34102376-34102614,
34102929-34103111
Length = 355
Score = 29.1 bits (62), Expect = 2.3
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = +1
Query: 115 GKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKY---MQHYTPDSGRGS-QTYGPTNNGYGF 282
G MS +F++ Y NP D W W Q Y M Y ++ R S Q G G
Sbjct: 111 GISMSRSFLKH--YANPLDDWIKFWPTQPPTYREKMGEYAVETQRVSMQLMEAILQGLGL 168
Query: 283 SASQIYGQTGGGSQIYGYTGEYPRA 357
S + + GG Q YP++
Sbjct: 169 GPSYLQEKLEGGVQFVA-LNNYPQS 192
>10_08_0243 - 16124790-16125361,16126358-16126547
Length = 253
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 232 SGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYGYTGEY 348
SG GS Y N GYG++ S G +G G+ G G Y
Sbjct: 155 SGSGSSEY-TQNGGYGYAGSSSAGGSGAGAGA-GQAGGY 191
>07_03_0866 - 22134215-22135351
Length = 378
Score = 28.3 bits (60), Expect = 4.0
Identities = 25/95 (26%), Positives = 34/95 (35%), Gaps = 4/95 (4%)
Frame = +1
Query: 88 ERDLPYLPSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTN 267
E D P L G + E +P P + ++ + HY S +G GP
Sbjct: 248 EDDAPVLSRGTPPAPYVTESAPWPAPPPPYMTQQVYYVPVRPVHYLDPSSQGGYMPGPVY 307
Query: 268 NGYGFSASQIYG---QTGGG-SQIYGYTGEYPRAH 360
+ G S+ G TGG S G G Y H
Sbjct: 308 HIVGGGGSEARGDLYSTGGSVSAAAGVGGVYGVPH 342
>06_01_1161 - 9872947-9873800,9874187-9874331,9874628-9874681
Length = 350
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +1
Query: 139 IEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPT--NNG-YGFSASQIYGQT 309
+E++ PNP + W QK + H + PT N G +G Q+YG
Sbjct: 29 VERVELPNPASMVTAYW----QKMLPHSPMPTAILELLNPPTDVNQGVHGNGYDQVYGNG 84
Query: 310 GGGSQIYGYTGEYPRAH 360
G I GY+ Y +
Sbjct: 85 YDGGYINGYSHSYSNGY 101
>01_06_1794 - 39919363-39920025
Length = 220
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 253 YGPTNNGYGFSASQIYGQTGGGSQIYGYTGEY 348
Y + GYG S G GG YGY G Y
Sbjct: 75 YAASGGGYGGSTKANAGANYGGGGGYGYNGGY 106
>08_02_0648 - 19694538-19696569,19697151-19697998
Length = 959
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 243 ITNLWSNEQWLWIQC-FPNIWTDRRRIPNIRLHGRIPACSLP 365
I ++WS + W IQC FP+ R + R+ +CS P
Sbjct: 288 IDDVWSKQAWKDIQCAFPSNNNASRIMMTTRIQDVAKSCSFP 329
>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
Length = 697
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 188 GRRNYRNICSIIRQ--IRVGDHKLMVQRTMVMDSVLPKYMDRQEADPKYTV 334
G RNY +++Q I+ +HK + ++ L + M Q ADPK T+
Sbjct: 365 GIRNYEEEVRLLKQKHIKQYEHKFDKSVVHISEAWLDERMQMQNADPKATL 415
>06_01_0048 + 436156-436406,436514-436693,436725-437133
Length = 279
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +1
Query: 67 DDMHQLKERDLPYLPSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTP 228
DD+H + R P G R+ + A G WR +W P+LQ TP
Sbjct: 72 DDLHGSRRRP-PRRDGGARLGNDGVGGAA--GDGQWWRCQWQPRLQPEAVAATP 122
>10_08_0241 - 16111792-16112367
Length = 191
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 232 SGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYGYTG 342
+G+GS ++N YG AS G GGG YG +G
Sbjct: 50 AGKGSGVGSGSSNYYGAHASGGGGGGGGGYSQYGGSG 86
>10_08_0216 - 15942379-15942852,15942956-15943033
Length = 183
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +1
Query: 217 HYTP--DSGRGSQTYGPTNNGYGFSASQIYGQTGG 315
+Y P G G G GYG+ A YGQ GG
Sbjct: 104 YYGPYASGGGGGGAGGGGGGGYGYGAGGGYGQAGG 138
>06_03_0500 +
21470681-21470952,21471049-21471089,21472322-21472485,
21472577-21472679,21472806-21472975,21473766-21474239
Length = 407
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 229 DSGRGSQT-YGPTNNGYGFSASQIYGQTG--GGSQIYGYTG 342
+SG S YG GY +A+ YG TG G + YGY G
Sbjct: 291 NSGSSSSGGYGGYGGGYRSAAAAYYGSTGYAGYGRGYGYGG 331
>06_01_0690 + 5033943-5034740
Length = 265
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 220 YTPDSGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYG-YTGEY 348
Y G G G N G G+ + YGQ GG YG Y G Y
Sbjct: 149 YAQGGGGGGGGGGGQNGGSGYGSGSGYGQAGG----YGPYGGGY 188
>04_03_0331 +
14510848-14511124,14511139-14511528,14511708-14511997,
14512080-14512154,14512194-14512409,14512727-14512795,
14512941-14513891
Length = 755
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = +1
Query: 229 DSGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYGYTGEY 348
DSG G YG N G F G GGGS I Y E+
Sbjct: 27 DSGHG---YGDANAGRVFGDGNNLGGYGGGSTILLYGAEH 63
>10_08_0898 + 21424379-21424792,21424974-21425723
Length = 387
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 229 DSGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYGYTGEYPRAHY 363
D G G TY N G +A+ + G GGG GY+ + H+
Sbjct: 12 DLGMGMSTYH--NASGGIAAAPMMGHHGGGGGGGGYSAAHHHHHH 54
>10_08_0223 - 15986763-15987575
Length = 270
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 232 SGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYGYTGEYPRA 357
+G G G TN GYG + YG G S G + P A
Sbjct: 84 AGGGGGGGGGTNGGYGSGSGSGYGMGSGSSGGSGSSASAPVA 125
>10_08_0218 - 15967064-15967906
Length = 280
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 220 YTPDSGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYGYTGEY 348
Y G+G G N G G+ + YGQ G YG G Y
Sbjct: 150 YAQGGGQGGGGGGGQNGGSGYGSGSGYGQAGS----YGPGGAY 188
>10_08_0196 + 15656385-15656400,15657425-15657797,15659096-15659363
Length = 218
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 166 GDSWRSEWTPQLQKYMQHYTPDSGRG----SQTYGPTNNGYGFSASQIYGQTGGGSQIY 330
GD WR + TP LQ+ T G G S +G ++G G + G+ GG S +
Sbjct: 152 GDVWRLDSTPSLQRLGMAATAGGGGGAWDESGGWGEASSG-GSGRWRRPGRRGGNSYFF 209
>08_02_0729 +
20466352-20466506,20468137-20468395,20469368-20469502,
20470755-20470879,20471027-20471082,20471137-20471180,
20471214-20471309
Length = 289
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 169 DSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGY--GFSASQIYGQTGGG-SQIYGYT 339
D R++W + +++ H+ GR ++T+ + G G + S +YG+ GGG S G +
Sbjct: 29 DGGRNDW--RSNRWVGHF----GRVARTFRWSQEGEVAGIAKSLVYGEPGGGLSGQLGVS 82
Query: 340 GE 345
GE
Sbjct: 83 GE 84
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/64 (29%), Positives = 22/64 (34%)
Frame = +1
Query: 163 PGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYGYTG 342
PG + P HY G G + P G GQ GGGS YG
Sbjct: 381 PGQPMNNPHAPMAAGPGHHYAKPRGPGGSSRYPQGGNQGGGYPNRGGQGGGGS--YG-NA 437
Query: 343 EYPR 354
YP+
Sbjct: 438 PYPQ 441
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,833,256
Number of Sequences: 37544
Number of extensions: 314523
Number of successful extensions: 999
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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