Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306F01f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 25 1.5
AF230521-1|AAF36974.2| 185|Anopheles gambiae homeobox transcrip... 25 2.0
DQ974174-1|ABJ52814.1| 391|Anopheles gambiae serpin 18 protein. 24 3.6
L10440-1|AAA29360.1| 154|Anopheles gambiae transposase protein. 23 6.2
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 23 6.2
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 23 6.2
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 23 6.2
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 23 6.2
AF164151-1|AAD47075.1| 148|Anopheles gambiae translation initia... 23 6.2
AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid transpo... 23 8.2
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 23 8.2
>AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein
homolog protein.
Length = 394
Score = 25.0 bits (52), Expect = 1.5
Identities = 16/80 (20%), Positives = 31/80 (38%)
Frame = +1
Query: 154 YPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYG 333
YP+P + + +P + TP ++GP+ G + G +GG
Sbjct: 55 YPHP-HVFHPQSSPDWSSHENFSTPPQTSLGLSHGPSPGAGGTGSGGSGGGSGGIGSGAL 113
Query: 334 YTGEYPRAHYPRRRSDYDSN 393
+ G+ P H+ + +N
Sbjct: 114 HLGQNPNLHHHHHHHHHGNN 133
>AF230521-1|AAF36974.2| 185|Anopheles gambiae homeobox
transcription factor protein.
Length = 185
Score = 24.6 bits (51), Expect = 2.0
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +1
Query: 169 DSW---RSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNG 273
D W S ++ YMQ+Y+ S QT GP ++G
Sbjct: 127 DGWSYPHSHYSHNQYYYMQNYSNYSQHNFQTAGPISSG 164
>DQ974174-1|ABJ52814.1| 391|Anopheles gambiae serpin 18 protein.
Length = 391
Score = 23.8 bits (49), Expect = 3.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 278 DSVLPKYMDRQEADPKYTV 334
D LPK+ R++ DPK T+
Sbjct: 284 DLKLPKFFVREKTDPKQTL 302
>L10440-1|AAA29360.1| 154|Anopheles gambiae transposase protein.
Length = 154
Score = 23.0 bits (47), Expect = 6.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 202 QKYMQHYTPDSGRGSQTYGPT 264
+ ++ HYTP+S R S + T
Sbjct: 35 ETWLHHYTPESNRQSAQWTAT 55
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 23.0 bits (47), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 193 PQLQKYMQHYTPDSGRGSQTY 255
P+L +M + P + RGSQ Y
Sbjct: 157 PRLHFFMPGFAPLTSRGSQQY 177
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 23.0 bits (47), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 193 PQLQKYMQHYTPDSGRGSQTY 255
P+L +M + P + RGSQ Y
Sbjct: 157 PRLHFFMPGFAPLTSRGSQQY 177
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 23.0 bits (47), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 193 PQLQKYMQHYTPDSGRGSQTY 255
P+L +M + P + RGSQ Y
Sbjct: 157 PRLHFFMPGFAPLTSRGSQQY 177
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 23.0 bits (47), Expect = 6.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 193 PQLQKYMQHYTPDSGRGSQTY 255
P+L +M + P + RGSQ Y
Sbjct: 157 PRLHFFMPGFAPLTSRGSQQY 177
>AF164151-1|AAD47075.1| 148|Anopheles gambiae translation
initiation factor 4C (1A) protein.
Length = 148
Score = 23.0 bits (47), Expect = 6.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 220 YTPDSGRGSQTYG 258
YTPD R +TYG
Sbjct: 95 YTPDEARNLKTYG 107
>AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid
transporter Ag_AAT8 protein.
Length = 636
Score = 22.6 bits (46), Expect = 8.2
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 139 IEQLAYPNPGDSWRSEWTP 195
I+ YP P RSEW P
Sbjct: 187 IDAFMYPLPWAHCRSEWQP 205
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 22.6 bits (46), Expect = 8.2
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 229 DSGRGSQTYGPTNN 270
D+G+ S+++G TNN
Sbjct: 564 DAGKASRSFGQTNN 577
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,933
Number of Sequences: 2352
Number of extensions: 11542
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -