Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306F01f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29074-1|CAA82315.1| 623|Homo sapiens cytokeratin 9 protein. 34 0.35
X75015-1|CAA52924.1| 622|Homo sapiens keratin 9 protein. 34 0.35
S69510-1|AAC60619.1| 622|Homo sapiens cytokeratin 9 protein. 34 0.35
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 31 2.4
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 31 2.4
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 31 2.4
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 31 2.4
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 31 2.4
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 31 2.4
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 31 3.2
BC129993-1|AAI29994.1| 1139|Homo sapiens otoancorin protein. 31 3.2
BC129992-1|AAI29993.1| 1138|Homo sapiens OTOA protein protein. 31 3.2
BC038458-1|AAH38458.1| 548|Homo sapiens OTOA protein protein. 31 3.2
AK093062-1|BAC04040.1| 815|Homo sapiens protein ( Homo sapiens ... 31 3.2
AK057335-1|BAB71433.1| 418|Homo sapiens protein ( Homo sapiens ... 31 3.2
X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein ... 30 5.7
AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein. 30 5.7
L41840-1|AAC41758.1| 3224|Homo sapiens nucleoporin protein. 29 7.5
D42063-1|BAA07662.1| 3224|Homo sapiens RanBP2 (Ran-binding prote... 29 7.5
BC066365-1|AAH66365.1| 388|Homo sapiens single stranded DNA bin... 29 7.5
BC004335-1|AAH04335.2| 216|Homo sapiens SSBP3 protein protein. 29 7.5
BC003605-1|AAH03605.1| 368|Homo sapiens single stranded DNA bin... 29 7.5
AY026310-2|AAK21985.1| 361|Homo sapiens single stranded DNA bin... 29 7.5
AY026310-1|AAK21984.1| 388|Homo sapiens single stranded DNA bin... 29 7.5
AL354778-1|CAI22988.1| 283|Homo sapiens single stranded DNA bin... 29 7.5
AL161644-7|CAI23563.1| 368|Homo sapiens single stranded DNA bin... 29 7.5
AL161644-6|CAI23562.1| 388|Homo sapiens single stranded DNA bin... 29 7.5
AL161644-5|CAI23561.1| 169|Homo sapiens single stranded DNA bin... 29 7.5
AL161644-4|CAI23560.1| 156|Homo sapiens single stranded DNA bin... 29 7.5
AL161644-3|CAI23559.1| 283|Homo sapiens single stranded DNA bin... 29 7.5
AL035415-2|CAI22488.1| 368|Homo sapiens single stranded DNA bin... 29 7.5
AL035415-1|CAI22487.1| 388|Homo sapiens single stranded DNA bin... 29 7.5
AK001217-1|BAA91561.1| 278|Homo sapiens protein ( Homo sapiens ... 29 7.5
AF500116-1|AAM22101.1| 368|Homo sapiens single-stranded DNA-bin... 29 7.5
AC010095-2|AAY14984.1| 3224|Homo sapiens unknown protein. 29 7.5
AB209483-1|BAD92720.1| 3138|Homo sapiens RAN binding protein 2 v... 29 7.5
DQ903855-1|ABI78944.1| 2154|Homo sapiens SEC16L protein. 29 9.9
BC125019-1|AAI25020.1| 1727|Homo sapiens SEC16A protein protein. 29 9.9
BC125018-1|AAI25019.1| 1961|Homo sapiens SEC16A protein protein. 29 9.9
BC098454-1|AAH98454.1| 536|Homo sapiens SEC16A protein protein. 29 9.9
BC028183-1|AAH28183.1| 1062|Homo sapiens SEC16A protein protein. 29 9.9
BC008332-1|AAH08332.1| 751|Homo sapiens KIAA0310 protein protein. 29 9.9
AL592301-21|CAI13952.1| 2134|Homo sapiens KIAA0310 protein. 29 9.9
AL592301-20|CAI13951.1| 1059|Homo sapiens KIAA0310 protein. 29 9.9
AL592301-19|CAI13950.1| 505|Homo sapiens KIAA0310 protein. 29 9.9
AL592301-18|CAI13949.1| 751|Homo sapiens KIAA0310 protein. 29 9.9
AB002308-1|BAA20769.4| 2388|Homo sapiens KIAA0310 protein protein. 29 9.9
>Z29074-1|CAA82315.1| 623|Homo sapiens cytokeratin 9 protein.
Length = 623
Score = 33.9 bits (74), Expect = 0.35
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 220 YTPDSGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYGYTG 342
++ GRG +++GYG +S++ G+ GGGS Y Y G
Sbjct: 35 FSSSGGRGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGG 75
>X75015-1|CAA52924.1| 622|Homo sapiens keratin 9 protein.
Length = 622
Score = 33.9 bits (74), Expect = 0.35
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 220 YTPDSGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYGYTG 342
++ GRG +++GYG +S++ G+ GGGS Y Y G
Sbjct: 34 FSSSGGRGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGG 74
>S69510-1|AAC60619.1| 622|Homo sapiens cytokeratin 9 protein.
Length = 622
Score = 33.9 bits (74), Expect = 0.35
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 220 YTPDSGRGSQTYGPTNNGYGFSASQIYGQTGGGSQIYGYTG 342
++ GRG +++GYG +S++ G+ GGGS Y Y G
Sbjct: 34 FSSSGGRGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGG 74
>X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein.
Length = 589
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 133 AFIEQLAYPNPGDSW---RSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYGFSASQIYG 303
++ EQ Y DS+ + + Q + Y H+T D R YG N GYG SQ G
Sbjct: 125 SYDEQSNYDQQHDSYSQNQQSYHSQRENY-SHHTQDDRRDVSRYGEDNRGYG--GSQGGG 181
Query: 304 QTGGG 318
+ GG
Sbjct: 182 RGRGG 186
Score = 29.9 bits (64), Expect = 5.7
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +1
Query: 214 QHYTPDSGRGSQTYGPTN---NGYGFSASQIYGQTGGGSQIYGYTGEYPRAHYP-RRRSD 381
Q Y+ GSQ YG + +GYG + YGQ G YG + Y +++S
Sbjct: 15 QSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQSYSQSYGGYENQKQSS 74
Query: 382 Y 384
Y
Sbjct: 75 Y 75
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 133 AFIEQLAYPNPGDSW---RSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYGFSASQIYG 303
++ EQ Y DS+ + + Q + Y H+T D R YG N GYG SQ G
Sbjct: 128 SYDEQSNYDQQHDSYSQNQQSYHSQRENY-SHHTQDDRRDVSRYGEDNRGYG--GSQGGG 184
Query: 304 QTGGG 318
+ GG
Sbjct: 185 RGRGG 189
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +1
Query: 214 QHYTPDSGRGSQTYGPTN---NGYGFSASQIYGQTGGGSQIYG 333
Q Y+ GSQ YG + +GYG + YGQ G YG
Sbjct: 15 QSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYG 57
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 133 AFIEQLAYPNPGDSW---RSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYGFSASQIYG 303
++ EQ Y DS+ + + Q + Y H+T D R YG N GYG SQ G
Sbjct: 128 SYDEQSNYDQQHDSYSQNQQSYHSQRENY-SHHTQDDRRDVSRYGEDNRGYG--GSQGGG 184
Query: 304 QTGGG 318
+ GG
Sbjct: 185 RGRGG 189
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +1
Query: 214 QHYTPDSGRGSQTYGPTN---NGYGFSASQIYGQTGGGSQIYG 333
Q Y+ GSQ YG + +GYG + YGQ G YG
Sbjct: 15 QSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYG 57
>AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 589
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 133 AFIEQLAYPNPGDSW---RSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYGFSASQIYG 303
++ EQ Y DS+ + + Q + Y H+T D R YG N GYG SQ G
Sbjct: 125 SYDEQSNYDQQHDSYSQNQQSYHSQRENY-SHHTQDDRRDVSRYGEDNRGYG--GSQGGG 181
Query: 304 QTGGG 318
+ GG
Sbjct: 182 RGRGG 186
Score = 29.9 bits (64), Expect = 5.7
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +1
Query: 214 QHYTPDSGRGSQTYGPTN---NGYGFSASQIYGQTGGGSQIYGYTGEYPRAHYP-RRRSD 381
Q Y+ GSQ YG + +GYG + YGQ G YG + Y +++S
Sbjct: 15 QSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQSYSQSYGGYENQKQSS 74
Query: 382 Y 384
Y
Sbjct: 75 Y 75
>AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein.
Length = 589
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 133 AFIEQLAYPNPGDSW---RSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYGFSASQIYG 303
++ EQ Y DS+ + + Q + Y H+T D R YG N GYG SQ G
Sbjct: 125 SYDEQSNYDQQHDSYSQNQQSYHSQRENY-SHHTQDDRRDVSRYGEDNRGYG--GSQGGG 181
Query: 304 QTGGG 318
+ GG
Sbjct: 182 RGRGG 186
Score = 29.9 bits (64), Expect = 5.7
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +1
Query: 214 QHYTPDSGRGSQTYGPTN---NGYGFSASQIYGQTGGGSQIYGYTGEYPRAHYP-RRRSD 381
Q Y+ GSQ YG + +GYG + YGQ G YG + Y +++S
Sbjct: 15 QSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQSYSQSYGGYENQKQSS 74
Query: 382 Y 384
Y
Sbjct: 75 Y 75
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 133 AFIEQLAYPNPGDSW---RSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYGFSASQIYG 303
++ EQ Y DS+ + + Q + Y H+T D R YG N GYG SQ G
Sbjct: 128 SYDEQSNYDQQHDSYSQNQQSYHSQRENY-SHHTQDDRRDVSRYGEDNRGYG--GSQGGG 184
Query: 304 QTGGG 318
+ GG
Sbjct: 185 RGRGG 189
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +1
Query: 214 QHYTPDSGRGSQTYGPTN---NGYGFSASQIYGQTGGGSQIYG 333
Q Y+ GSQ YG + +GYG + YGQ G YG
Sbjct: 15 QSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYG 57
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 30.7 bits (66), Expect = 3.2
Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 15/82 (18%)
Frame = +1
Query: 151 AYPN-PGDSWRSEWT-PQLQKYMQHYTP--DSGRGSQTYGP----TNNGYGF-SASQIYG 303
AYP PG + + + P Q+ Y+ D+G G +Y N GYG SA Q YG
Sbjct: 16 AYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTGYGQSSYSSYGQSQNTGYGTQSAPQGYG 75
Query: 304 QTGG-GSQ-----IYGYTGEYP 351
TGG GS YG YP
Sbjct: 76 STGGYGSSQSSQSSYGQQSSYP 97
>BC129993-1|AAI29994.1| 1139|Homo sapiens otoancorin protein.
Length = 1139
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 172 SWRSEWTP-QLQKYMQHYTPDSGRGSQ 249
SW++EWTP Q + +Q Y DSG Q
Sbjct: 916 SWQTEWTPGQAESILQGYLDDSGYSIQ 942
>BC129992-1|AAI29993.1| 1138|Homo sapiens OTOA protein protein.
Length = 1138
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 172 SWRSEWTP-QLQKYMQHYTPDSGRGSQ 249
SW++EWTP Q + +Q Y DSG Q
Sbjct: 915 SWQTEWTPGQAESILQGYLDDSGYSIQ 941
>BC038458-1|AAH38458.1| 548|Homo sapiens OTOA protein protein.
Length = 548
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 172 SWRSEWTP-QLQKYMQHYTPDSGRGSQ 249
SW++EWTP Q + +Q Y DSG Q
Sbjct: 325 SWQTEWTPGQAESILQGYLDDSGYSIQ 351
>AK093062-1|BAC04040.1| 815|Homo sapiens protein ( Homo sapiens
cDNA FLJ35743 fis, clone TESTI2004318. ).
Length = 815
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 172 SWRSEWTP-QLQKYMQHYTPDSGRGSQ 249
SW++EWTP Q + +Q Y DSG Q
Sbjct: 592 SWQTEWTPGQAESILQGYLDDSGYSIQ 618
>AK057335-1|BAB71433.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ32773 fis, clone TESTI2001991. ).
Length = 418
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 172 SWRSEWTP-QLQKYMQHYTPDSGRGSQ 249
SW++EWTP Q + +Q Y DSG Q
Sbjct: 202 SWQTEWTPGQAESILQGYLDDSGYSIQ 228
>X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein
protein.
Length = 525
Score = 29.9 bits (64), Expect = 5.7
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Frame = +1
Query: 151 AYPN-PGDSWRSEWT-PQLQKYMQHY---TPDSGRGSQTY---GPTNNGYGF-SASQIYG 303
AYP PG + + + P Q+ Y T SG G +Y G + N YG S Q YG
Sbjct: 16 AYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNSYGTQSTPQGYG 75
Query: 304 QTGG-GSQ-----IYGYTGEYP 351
TGG GS YG YP
Sbjct: 76 STGGYGSSQSSQSSYGQQSSYP 97
>AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein.
Length = 525
Score = 29.9 bits (64), Expect = 5.7
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Frame = +1
Query: 151 AYPN-PGDSWRSEWT-PQLQKYMQHY---TPDSGRGSQTY---GPTNNGYGF-SASQIYG 303
AYP PG + + + P Q+ Y T SG G +Y G + N YG S Q YG
Sbjct: 16 AYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNSYGTQSTPQGYG 75
Query: 304 QTGG-GSQ-----IYGYTGEYP 351
TGG GS YG YP
Sbjct: 76 STGGYGSSQSSQSSYGQQSSYP 97
>L41840-1|AAC41758.1| 3224|Homo sapiens nucleoporin protein.
Length = 3224
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 259 PTNNGYGFSASQIYGQTGGGSQIYGYT 339
P NG GF A I GQ G I+G T
Sbjct: 1915 PLENGTGFQAQDISGQKNGRGVIFGQT 1941
>D42063-1|BAA07662.1| 3224|Homo sapiens RanBP2 (Ran-binding protein 2)
protein.
Length = 3224
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 259 PTNNGYGFSASQIYGQTGGGSQIYGYT 339
P NG GF A I GQ G I+G T
Sbjct: 1915 PLENGTGFQAQDISGQKNGRGVIFGQT 1941
>BC066365-1|AAH66365.1| 388|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 388
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 182 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 222
>BC004335-1|AAH04335.2| 216|Homo sapiens SSBP3 protein protein.
Length = 216
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 10 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 50
>BC003605-1|AAH03605.1| 368|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 368
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 162 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 202
>AY026310-2|AAK21985.1| 361|Homo sapiens single stranded DNA
binding protein-3 protein.
Length = 361
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 155 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 195
>AY026310-1|AAK21984.1| 388|Homo sapiens single stranded DNA
binding protein-3 protein.
Length = 388
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 182 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 222
>AL354778-1|CAI22988.1| 283|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 283
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 86 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 126
>AL161644-7|CAI23563.1| 368|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 368
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 162 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 202
>AL161644-6|CAI23562.1| 388|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 388
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 182 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 222
>AL161644-5|CAI23561.1| 169|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 169
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 31 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 71
>AL161644-4|CAI23560.1| 156|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 156
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 13 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 53
>AL161644-3|CAI23559.1| 283|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 283
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 86 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 126
>AL035415-2|CAI22488.1| 368|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 368
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 162 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 202
>AL035415-1|CAI22487.1| 388|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 388
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 182 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 222
>AK001217-1|BAA91561.1| 278|Homo sapiens protein ( Homo sapiens
cDNA FLJ10355 fis, clone NT2RM2001196. ).
Length = 278
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 72 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 112
>AF500116-1|AAM22101.1| 368|Homo sapiens single-stranded
DNA-binding protein protein.
Length = 368
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 157 PNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNNGYG 279
PN D R + P + MQ P G G GP N G G
Sbjct: 162 PNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSG 202
>AC010095-2|AAY14984.1| 3224|Homo sapiens unknown protein.
Length = 3224
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 259 PTNNGYGFSASQIYGQTGGGSQIYGYT 339
P NG GF A I GQ G I+G T
Sbjct: 1915 PLENGTGFQAQDISGQKNGRGVIFGQT 1941
>AB209483-1|BAD92720.1| 3138|Homo sapiens RAN binding protein 2
variant protein.
Length = 3138
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 259 PTNNGYGFSASQIYGQTGGGSQIYGYT 339
P NG GF A I GQ G I+G T
Sbjct: 1829 PLENGTGFQAQDISGQKNGRGVIFGQT 1855
>DQ903855-1|ABI78944.1| 2154|Homo sapiens SEC16L protein.
Length = 2154
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 109 PSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNN 270
P KR A ++ P G+SW W P +K + Y PD S + N
Sbjct: 1908 PETKRPGQAAKKETKEPKKGESWFFRWLPG-KKKTEAYLPDDKNKSIVWDEKKN 1960
>BC125019-1|AAI25020.1| 1727|Homo sapiens SEC16A protein protein.
Length = 1727
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 109 PSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNN 270
P KR A ++ P G+SW W P +K + Y PD S + N
Sbjct: 1476 PETKRPGQAAKKETKEPKKGESWFFRWLPG-KKKTEAYLPDDKNKSIVWDEKKN 1528
>BC125018-1|AAI25019.1| 1961|Homo sapiens SEC16A protein protein.
Length = 1961
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 109 PSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNN 270
P KR A ++ P G+SW W P +K + Y PD S + N
Sbjct: 1713 PETKRPGQAAKKETKEPKKGESWFFRWLPG-KKKTEAYLPDDKNKSIVWDEKKN 1765
>BC098454-1|AAH98454.1| 536|Homo sapiens SEC16A protein protein.
Length = 536
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 109 PSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNN 270
P KR A ++ P G+SW W P +K + Y PD S + N
Sbjct: 243 PETKRPGQAAKKETKEPKKGESWFFRWLPG-KKKTEAYLPDDKNKSIVWDEKKN 295
>BC028183-1|AAH28183.1| 1062|Homo sapiens SEC16A protein protein.
Length = 1062
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 109 PSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNN 270
P KR A ++ P G+SW W P +K + Y PD S + N
Sbjct: 811 PETKRPGQAAKKETKEPKKGESWFFRWLPG-KKKTEAYLPDDKNKSIVWDEKKN 863
>BC008332-1|AAH08332.1| 751|Homo sapiens KIAA0310 protein protein.
Length = 751
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 109 PSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNN 270
P KR A ++ P G+SW W P +K + Y PD S + N
Sbjct: 480 PETKRPGQAAKKETKEPKKGESWFFRWLPG-KKKTEAYLPDDKNKSIVWDEKKN 532
>AL592301-21|CAI13952.1| 2134|Homo sapiens KIAA0310 protein.
Length = 2134
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 109 PSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNN 270
P KR A ++ P G+SW W P +K + Y PD S + N
Sbjct: 1908 PETKRPGQAAKKETKEPKKGESWFFRWLPG-KKKTEAYLPDDKNKSIVWDEKKN 1960
>AL592301-20|CAI13951.1| 1059|Homo sapiens KIAA0310 protein.
Length = 1059
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 109 PSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNN 270
P KR A ++ P G+SW W P +K + Y PD S + N
Sbjct: 808 PETKRPGQAAKKETKEPKKGESWFFRWLPG-KKKTEAYLPDDKNKSIVWDEKKN 860
>AL592301-19|CAI13950.1| 505|Homo sapiens KIAA0310 protein.
Length = 505
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 109 PSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNN 270
P KR A ++ P G+SW W P +K + Y PD S + N
Sbjct: 215 PETKRPGQAAKKETKEPKKGESWFFRWLPG-KKKTEAYLPDDKNKSIVWDEKKN 267
>AL592301-18|CAI13949.1| 751|Homo sapiens KIAA0310 protein.
Length = 751
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 109 PSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNN 270
P KR A ++ P G+SW W P +K + Y PD S + N
Sbjct: 480 PETKRPGQAAKKETKEPKKGESWFFRWLPG-KKKTEAYLPDDKNKSIVWDEKKN 532
>AB002308-1|BAA20769.4| 2388|Homo sapiens KIAA0310 protein protein.
Length = 2388
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 109 PSGKRMSTAFIEQLAYPNPGDSWRSEWTPQLQKYMQHYTPDSGRGSQTYGPTNN 270
P KR A ++ P G+SW W P +K + Y PD S + N
Sbjct: 2117 PETKRPGQAAKKETKEPKKGESWFFRWLPG-KKKTEAYLPDDKNKSIVWDEKKN 2169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,091,865
Number of Sequences: 237096
Number of extensions: 1699233
Number of successful extensions: 7218
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 6964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7206
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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