Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306E12f
         (480 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.068
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.5  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   3.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 27.5 bits (58), Expect = 0.068
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +3

Query: 201 FVLAFSAFFLWMYSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLKTLC-LCTH 377
           + L FS    ++     + F +++   F  SE +  +++     YFR +  KT C L T 
Sbjct: 353 YTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKYRETYFRLSKTKTFCTLVTA 412

Query: 378 SSFCGIRALAVPLLL 422
             +C +    +  LL
Sbjct: 413 LVYCSLAIFVLCELL 427


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 122 GGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDV 238
           G +T L   +CLLH +     L+ +    G L  + + V
Sbjct: 268 GVHTLLILFSCLLHLVVTPYYLLIEVCNAGYLPFILLQV 306


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +3

Query: 339 RSNFLKTLCLCTHSSFCGIRALAVPLLLQSH 431
           RSN+ K  CL       G    A   LL+ H
Sbjct: 81  RSNWFKIHCLLQEQQQAGANMAAAANLLRPH 111


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 92  SEGLQQFLLLGGNTFLAALACL 157
           SE ++QFL     TF+A LA L
Sbjct: 461 SEMVKQFLFTQKFTFVAGLATL 482


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 154 PPSLYCGGPQPGR 192
           P SLYCG P  G+
Sbjct: 356 PWSLYCGEPPCGQ 368


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,307
Number of Sequences: 336
Number of extensions: 1874
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)