Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306E10f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   2.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.7  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   8.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.7  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 333 RHSQPVPGLT*GTQCTLFPGTCYQKAWTLHN 241
           ++S  + G+   TQC + PG  ++  + +HN
Sbjct: 141 KNSPYMDGVPFVTQCPIHPGMTFRYHFNVHN 171


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +1

Query: 232 STDIMESPSLLVTSPWKKSTLGTSRQPRHWLTMPTSSITFKKMKSN 369
           S D   S + +  S ++  T GT+  P   L  P   IT+   + N
Sbjct: 20  SGDSTSSATSIDLSTFRVPTYGTTSHPTSKLVPPDERITYSWTEIN 65


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +1

Query: 232 STDIMESPSLLVTSPWKKSTLGTSRQPRHWLTMPTSSITFKKMKSN 369
           S D   S + +  S ++  T GT+  P   L  P   IT+   + N
Sbjct: 20  SGDSTSSATSIDLSTFRVPTYGTTSHPTSKLVPPDERITYSWTEIN 65


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 309 AQALADYADLINYLQKDE 362
           A +L  Y DL+ Y  K+E
Sbjct: 618 ANSLRQYEDLLEYEAKEE 635


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +2

Query: 407 WNVSCLYKDKVSPPSGRSYSRLSSHT 484
           WN  C      S P G    + ++HT
Sbjct: 179 WNNPCSINSTSSQPVGTQIHQQTNHT 204


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 135 FVVIIFVALSSWSGHSCLLSLYLDEKL 55
           FV+ I VAL+ ++    + +LYL  KL
Sbjct: 247 FVIKILVALNFFTSTLEIDNLYLKHKL 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,777
Number of Sequences: 336
Number of extensions: 3080
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)