Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306E05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    40   1e-05
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   2.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   5.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.6  

>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 40.3 bits (90), Expect = 1e-05
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
 Frame = +1

Query: 94  NSLVFLLYLLSGRPDWQRKINSELPPYA----MLCSEDLAGAPSVRAAINEAFRLLPTAP 261
           + + F +  L+  P  Q K+  E+         +  + L     +   + EA RL P+ P
Sbjct: 3   SGIAFAILCLAENPKVQEKLYEEVAAVIDNIENITMQQLQEMKYLEMVLKEAQRLYPSVP 62

Query: 262 FLARLLDSPMTIGGHKIPPGTFVLAHTAAACRXEENFWRAEEYLPERWI 408
            + R L+    IGG+  P  TF+          E+ F   E++ P R++
Sbjct: 63  VIERRLEVDCNIGGYDFPKDTFLSLFIYGMHHNEKYFPEPEKFDPNRYL 111


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 84  DASQQFGVSPVPTEWTSRLAKKN*FRTTTV 173
           D S+    +P P +W    +     RTTTV
Sbjct: 422 DGSKPVQTTPKPGQWVPEKSTSTTQRTTTV 451


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -2

Query: 103 PNCWLASQYRQL*SR*WQPSCRACPV 26
           P C L+    Q  S  WQ S RA  +
Sbjct: 257 PKCVLSDHGTQFISNTWQNSLRAADI 282


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +1

Query: 79  IETLANSLVFLLYLLSG 129
           IET+A S++F+L+ + G
Sbjct: 242 IETVAYSVIFILWHIVG 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,800
Number of Sequences: 336
Number of extensions: 2299
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)