Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306E05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...   122   2e-30
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   7.7  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score =  122 bits (295), Expect = 2e-30
 Identities = 66/139 (47%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
 Frame = +1

Query: 1   FLKILENPALDMRDKKAAIIDFITAGIETLANSLVFLLYLLSGRPDWQRKINSEL----P 168
           F  IL    LD+RDKKAAI+DFI AGI TL N+LVFL  L+   P  Q K+  E     P
Sbjct: 306 FQSILRQKNLDIRDKKAAIVDFIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETYALAP 365

Query: 169 PYAMLCSEDLAGAPSVRAAINEAFRLLPTAPFLARLLDSPMTIGGHKIPPGTFVLAHTAA 348
               L  ++L  A  +RA I E+ RL+PT   +AR+LD P+ + G+++  GT VL HT  
Sbjct: 366 AGCDLTIDNLRKAKYLRACITESLRLIPTTTCIARILDEPIELSGYRLTAGTVVLLHTWI 425

Query: 349 ACRXEENFWRAEEYLPERW 405
           A   EENF  A++YLPERW
Sbjct: 426 AGLNEENFKDAKKYLPERW 444



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 422 PHAYSLVAPFXRGRXMCPGK 481
           PH+  LVAPF  GR +CPGK
Sbjct: 450 PHSPLLVAPFGAGRRICPGK 469


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 270 CKKWSCRQ*SKGFIDRSSDRRCSC 199
           CKK++    S G   RS  R  SC
Sbjct: 207 CKKYAISSNSLGSRSRSFQRTSSC 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,235
Number of Sequences: 438
Number of extensions: 2534
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)