Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306E04f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p pro... 201 4e-52
AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-P... 201 4e-52
AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-P... 201 4e-52
AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p pro... 170 1e-42
AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-P... 170 1e-42
BT003619-1|AAO39622.1| 1167|Drosophila melanogaster GH12052p pro... 29 5.1
AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-P... 29 5.1
AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-P... 29 5.1
AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein. 29 5.1
BT023648-1|AAY85048.1| 126|Drosophila melanogaster IP05455p pro... 28 6.7
BT021440-1|AAX33588.1| 1214|Drosophila melanogaster GH07101p pro... 28 6.7
BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p pro... 28 6.7
BT009939-1|AAQ22408.1| 1108|Drosophila melanogaster SD05496p pro... 28 6.7
AY069524-1|AAL39669.1| 948|Drosophila melanogaster LD23883p pro... 28 6.7
AY061436-1|AAL28984.1| 542|Drosophila melanogaster LD36410p pro... 28 6.7
AE014296-1558|AAF50339.1| 126|Drosophila melanogaster CG13314-P... 28 6.7
AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA... 28 6.7
AE013599-2009|AAS64853.1| 1108|Drosophila melanogaster CG11798-P... 28 6.7
AE013599-2008|AAF58171.1| 1108|Drosophila melanogaster CG11798-P... 28 6.7
AE013599-2007|ABI31096.1| 1214|Drosophila melanogaster CG11798-P... 28 6.7
AY113398-1|AAM29403.1| 915|Drosophila melanogaster RE09008p pro... 28 8.8
AY069546-1|AAL39691.1| 429|Drosophila melanogaster LD27370p pro... 28 8.8
AE014296-2473|AAF49667.2| 429|Drosophila melanogaster CG6854-PA... 28 8.8
AE013599-3371|AAM68218.1| 915|Drosophila melanogaster CG5819-PB... 28 8.8
AE013599-3370|AAF46828.1| 915|Drosophila melanogaster CG5819-PA... 28 8.8
>AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p
protein.
Length = 160
Score = 201 bits (491), Expect = 4e-52
Identities = 98/144 (68%), Positives = 112/144 (77%), Gaps = 4/144 (2%)
Frame = +3
Query: 51 KREYMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEY 230
K +VAKKD+HA KH ELE IPNL VIKAMQSL SRG VKEQFAWRH+YWYLTNEGIE
Sbjct: 17 KEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEE 76
Query: 231 LRIFLHLPPEIVPATLKRSVRTETVRRGP-VGRPDAP---ARSAEDRSAYRRTPAAPGVA 398
LR +LHLPPEIVP+TLKR R+ETVR P VG P P +++ EDRSAYRR P GV
Sbjct: 77 LRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTGEDRSAYRRAPGGSGV- 135
Query: 399 PHDKKADVGPGSADLEFKGGYGRG 470
DKK DVGPG+ ++EF+GG+GRG
Sbjct: 136 --DKKGDVGPGAGEVEFRGGFGRG 157
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2
Query: 2 MLMPKQNRVAIYEYLFKEGV 61
M MPK +RVAIYEYLFKEGV
Sbjct: 1 MFMPKAHRVAIYEYLFKEGV 20
>AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-PC,
isoform C protein.
Length = 160
Score = 201 bits (491), Expect = 4e-52
Identities = 98/144 (68%), Positives = 112/144 (77%), Gaps = 4/144 (2%)
Frame = +3
Query: 51 KREYMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEY 230
K +VAKKD+HA KH ELE IPNL VIKAMQSL SRG VKEQFAWRH+YWYLTNEGIE
Sbjct: 17 KEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEE 76
Query: 231 LRIFLHLPPEIVPATLKRSVRTETVRRGP-VGRPDAP---ARSAEDRSAYRRTPAAPGVA 398
LR +LHLPPEIVP+TLKR R+ETVR P VG P P +++ EDRSAYRR P GV
Sbjct: 77 LRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTGEDRSAYRRAPGGSGV- 135
Query: 399 PHDKKADVGPGSADLEFKGGYGRG 470
DKK DVGPG+ ++EF+GG+GRG
Sbjct: 136 --DKKGDVGPGAGEVEFRGGFGRG 157
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2
Query: 2 MLMPKQNRVAIYEYLFKEGV 61
M MPK +RVAIYEYLFKEGV
Sbjct: 1 MFMPKAHRVAIYEYLFKEGV 20
>AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-PB,
isoform B protein.
Length = 160
Score = 201 bits (491), Expect = 4e-52
Identities = 98/144 (68%), Positives = 112/144 (77%), Gaps = 4/144 (2%)
Frame = +3
Query: 51 KREYMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEY 230
K +VAKKD+HA KH ELE IPNL VIKAMQSL SRG VKEQFAWRH+YWYLTNEGIE
Sbjct: 17 KEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEE 76
Query: 231 LRIFLHLPPEIVPATLKRSVRTETVRRGP-VGRPDAP---ARSAEDRSAYRRTPAAPGVA 398
LR +LHLPPEIVP+TLKR R+ETVR P VG P P +++ EDRSAYRR P GV
Sbjct: 77 LRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTGEDRSAYRRAPGGSGV- 135
Query: 399 PHDKKADVGPGSADLEFKGGYGRG 470
DKK DVGPG+ ++EF+GG+GRG
Sbjct: 136 --DKKGDVGPGAGEVEFRGGFGRG 157
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2
Query: 2 MLMPKQNRVAIYEYLFKEGV 61
M MPK +RVAIYEYLFKEGV
Sbjct: 1 MFMPKAHRVAIYEYLFKEGV 20
>AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p
protein.
Length = 162
Score = 170 bits (413), Expect = 1e-42
Identities = 86/144 (59%), Positives = 105/144 (72%), Gaps = 5/144 (3%)
Frame = +3
Query: 51 KREYMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEY 230
K +VAKKD KH+EL+KIPNLQVIK MQSL SRG+VKEQFAWRHFYW LTNEGIE
Sbjct: 16 KEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNEGIEE 75
Query: 231 LRIFLHLPPEIVPATLKRSVRTETVR-RGPVGRP----DAPARSAEDRSAYRRTPAAPGV 395
LR +LHLPPEIVP+TL ++ R+ VR RG G P +++ +DRS YRR P A G+
Sbjct: 76 LRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDDDRSNYRRGPGAYGM 135
Query: 396 APHDKKADVGPGSADLEFKGGYGR 467
DKK DVG G+ +E++GG+GR
Sbjct: 136 ---DKKGDVGAGTGRVEYRGGFGR 156
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 8 MPKQNRVAIYEYLFKEGV 61
+PK NRVAIYEYLFKEGV
Sbjct: 2 IPKANRVAIYEYLFKEGV 19
>AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-PA
protein.
Length = 163
Score = 170 bits (413), Expect = 1e-42
Identities = 86/144 (59%), Positives = 105/144 (72%), Gaps = 5/144 (3%)
Frame = +3
Query: 51 KREYMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEY 230
K +VAKKD KH+EL+KIPNLQVIK MQSL SRG+VKEQFAWRHFYW LTNEGIE
Sbjct: 17 KEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNEGIEE 76
Query: 231 LRIFLHLPPEIVPATLKRSVRTETVR-RGPVGRP----DAPARSAEDRSAYRRTPAAPGV 395
LR +LHLPPEIVP+TL ++ R+ VR RG G P +++ +DRS YRR P A G+
Sbjct: 77 LRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDDDRSNYRRGPGAYGM 136
Query: 396 APHDKKADVGPGSADLEFKGGYGR 467
DKK DVG G+ +E++GG+GR
Sbjct: 137 ---DKKGDVGAGTGRVEYRGGFGR 157
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2
Query: 2 MLMPKQNRVAIYEYLFKEGV 61
M +PK NRVAIYEYLFKEGV
Sbjct: 1 MFIPKANRVAIYEYLFKEGV 20
>BT003619-1|AAO39622.1| 1167|Drosophila melanogaster GH12052p protein.
Length = 1167
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 255 PEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTP 380
P AT+KRS+ R P G+P A A S RR+P
Sbjct: 947 PATQTATVKRSLSASRPLRMPNGQPLASAAPLRSASTVRRSP 988
>AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-PA
protein.
Length = 1644
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 255 PEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTP 380
P AT+KRS+ R P G+P A A S RR+P
Sbjct: 1424 PATQTATVKRSLSASRPLRMPNGQPLASAAPLRSASTVRRSP 1465
>AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-PA
protein.
Length = 1931
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 27 LLFMSTSLKREYMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWY 206
+LF S L+ ++ + HAPK+T + + + ++ L +R KE+ A+ W
Sbjct: 1239 ILFASIQLRLSQVLKRIVRHAPKNTSFPDLITIVGVAQLEQLLTR---KERAAYESMRWQ 1295
Query: 207 LTNEG 221
++G
Sbjct: 1296 SRDKG 1300
>AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein.
Length = 1644
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 255 PEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTP 380
P AT+KRS+ R P G+P A A S RR+P
Sbjct: 1424 PATQTATVKRSLSASRPLRMPNGQPLASAAPLRSASTVRRSP 1465
>BT023648-1|AAY85048.1| 126|Drosophila melanogaster IP05455p
protein.
Length = 126
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 36 MSTSLKREYMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQ 179
++ +L +E ++ KK+ A H E EKIP QV K K+ GY+ +
Sbjct: 83 IAANLAKESLLTKKEM-AVVHREAEKIPREQVYKL---FKNAGYLSSR 126
>BT021440-1|AAX33588.1| 1214|Drosophila melanogaster GH07101p protein.
Length = 1214
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Frame = +3
Query: 210 TNEGIEYLR----IFLHLPPEIVP-----ATLKRSVRTETVRRGPVGRPDAPARSAEDRS 362
T E IEYLR I L + P++ P + LKR + T RR P + APA S +
Sbjct: 1025 TEEYIEYLRNKEDITLTIAPKVQPPAPVTSLLKRQLDLSTPRRSP--KKAAPAHSNSASN 1082
Query: 363 AYRRT 377
A R++
Sbjct: 1083 ASRKS 1087
>BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p
protein.
Length = 1057
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 468 HVHSLP*IQDQLSLDQHQPFYHEVQHQGQQEY 373
H H +Q Q QHQ + + QHQ QQ++
Sbjct: 85 HQHQQQHMQQQQQQQQHQQQHQQQQHQQQQQH 116
>BT009939-1|AAQ22408.1| 1108|Drosophila melanogaster SD05496p protein.
Length = 1108
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Frame = +3
Query: 210 TNEGIEYLR----IFLHLPPEIVP-----ATLKRSVRTETVRRGPVGRPDAPARSAEDRS 362
T E IEYLR I L + P++ P + LKR + T RR P + APA S +
Sbjct: 919 TEEYIEYLRNKEDITLTIAPKVQPPAPVTSLLKRQLDLSTPRRSP--KKAAPAHSNSASN 976
Query: 363 AYRRT 377
A R++
Sbjct: 977 ASRKS 981
>AY069524-1|AAL39669.1| 948|Drosophila melanogaster LD23883p
protein.
Length = 948
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Frame = +3
Query: 210 TNEGIEYLR----IFLHLPPEIVP-----ATLKRSVRTETVRRGPVGRPDAPARSAEDRS 362
T E IEYLR I L + P++ P + LKR + T RR P + APA S +
Sbjct: 759 TEEYIEYLRNKEDITLTIAPKVQPPAPVTSLLKRQLDLSTPRRSP--KKAAPAHSNSASN 816
Query: 363 AYRRT 377
A R++
Sbjct: 817 ASRKS 821
>AY061436-1|AAL28984.1| 542|Drosophila melanogaster LD36410p
protein.
Length = 542
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Frame = +3
Query: 210 TNEGIEYLR----IFLHLPPEIVP-----ATLKRSVRTETVRRGPVGRPDAPARSAEDRS 362
T E IEYLR I L + P++ P + LKR + T RR P + APA S +
Sbjct: 353 TEEYIEYLRNKEDITLTIAPKVQPPAPVTSLLKRQLDLSTPRRSP--KKAAPAHSNSASN 410
Query: 363 AYRRT 377
A R++
Sbjct: 411 ASRKS 415
>AE014296-1558|AAF50339.1| 126|Drosophila melanogaster CG13314-PA
protein.
Length = 126
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 36 MSTSLKREYMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQ 179
++ +L +E ++ KK+ A H E EKIP QV K K+ GY+ +
Sbjct: 83 IAANLAKESLLTKKEM-AVVHREAEKIPREQVYKL---FKNAGYLSSR 126
>AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA
protein.
Length = 1039
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 468 HVHSLP*IQDQLSLDQHQPFYHEVQHQGQQEY 373
H H +Q Q QHQ + + QHQ QQ++
Sbjct: 85 HQHQQQHMQQQQQQQQHQQQHQQQQHQQQQQH 116
>AE013599-2009|AAS64853.1| 1108|Drosophila melanogaster CG11798-PB,
isoform B protein.
Length = 1108
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Frame = +3
Query: 210 TNEGIEYLR----IFLHLPPEIVP-----ATLKRSVRTETVRRGPVGRPDAPARSAEDRS 362
T E IEYLR I L + P++ P + LKR + T RR P + APA S +
Sbjct: 919 TEEYIEYLRNKEDITLTIAPKVQPPAPVTSLLKRQLDLSTPRRSP--KKAAPAHSNSASN 976
Query: 363 AYRRT 377
A R++
Sbjct: 977 ASRKS 981
>AE013599-2008|AAF58171.1| 1108|Drosophila melanogaster CG11798-PA,
isoform A protein.
Length = 1108
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Frame = +3
Query: 210 TNEGIEYLR----IFLHLPPEIVP-----ATLKRSVRTETVRRGPVGRPDAPARSAEDRS 362
T E IEYLR I L + P++ P + LKR + T RR P + APA S +
Sbjct: 919 TEEYIEYLRNKEDITLTIAPKVQPPAPVTSLLKRQLDLSTPRRSP--KKAAPAHSNSASN 976
Query: 363 AYRRT 377
A R++
Sbjct: 977 ASRKS 981
>AE013599-2007|ABI31096.1| 1214|Drosophila melanogaster CG11798-PC,
isoform C protein.
Length = 1214
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Frame = +3
Query: 210 TNEGIEYLR----IFLHLPPEIVP-----ATLKRSVRTETVRRGPVGRPDAPARSAEDRS 362
T E IEYLR I L + P++ P + LKR + T RR P + APA S +
Sbjct: 1025 TEEYIEYLRNKEDITLTIAPKVQPPAPVTSLLKRQLDLSTPRRSP--KKAAPAHSNSASN 1082
Query: 363 AYRRT 377
A R++
Sbjct: 1083 ASRKS 1087
>AY113398-1|AAM29403.1| 915|Drosophila melanogaster RE09008p
protein.
Length = 915
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 252 PPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDR-SAYRRTPAAPGVAPHDKKAD 419
PP + P T+K S + T+++ PV D PA ED SA R+ P++ +A ++ D
Sbjct: 789 PPVLPPPTMKVSAQVYTLQQSPVLELD-PA--IEDYFSAARKQPSSSTIASDFQELD 842
>AY069546-1|AAL39691.1| 429|Drosophila melanogaster LD27370p
protein.
Length = 429
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 391 PGAAGVRLYADLSSAERAGASGRPTGPRRTVS 296
PG+A V A +SA ++G P G +R+VS
Sbjct: 269 PGSAAVLAPATTTSASSVSSNGAPMGGKRSVS 300
>AE014296-2473|AAF49667.2| 429|Drosophila melanogaster CG6854-PA,
isoform A protein.
Length = 429
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 391 PGAAGVRLYADLSSAERAGASGRPTGPRRTVS 296
PG+A V A +SA ++G P G +R+VS
Sbjct: 269 PGSAAVLAPATTTSASSVSSNGAPMGGKRSVS 300
>AE013599-3371|AAM68218.1| 915|Drosophila melanogaster CG5819-PB,
isoform B protein.
Length = 915
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 252 PPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDR-SAYRRTPAAPGVAPHDKKAD 419
PP + P T+K S + T+++ PV D PA ED SA R+ P++ +A ++ D
Sbjct: 789 PPVLPPPTMKVSAQVYTLQQSPVLELD-PA--IEDYFSAARKQPSSSTIASDFQELD 842
>AE013599-3370|AAF46828.1| 915|Drosophila melanogaster CG5819-PA,
isoform A protein.
Length = 915
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 252 PPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDR-SAYRRTPAAPGVAPHDKKAD 419
PP + P T+K S + T+++ PV D PA ED SA R+ P++ +A ++ D
Sbjct: 789 PPVLPPPTMKVSAQVYTLQQSPVLELD-PA--IEDYFSAARKQPSSSTIASDFQELD 842
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,141,453
Number of Sequences: 53049
Number of extensions: 455607
Number of successful extensions: 1784
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1769
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -