Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306E03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058258-1|AAL13487.1|  345|Drosophila melanogaster GH01554p pro...    28   6.7  
AF313391-1|AAG32064.1|  345|Drosophila melanogaster peptidoglyca...    28   6.7  
AE014298-2234|AAF48519.1|  345|Drosophila melanogaster CG8995-PA...    28   6.7  
AY094943-1|AAM11296.1|  469|Drosophila melanogaster RH56938p pro...    28   8.8  
AE014296-3283|AAF49064.2| 1029|Drosophila melanogaster CG7323-PA...    28   8.8  

>AY058258-1|AAL13487.1|  345|Drosophila melanogaster GH01554p
           protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -3

Query: 432 LVNQANAVQ---NTNISYETNTHIYNLKKFN 349
           L+N  N++Q   N NIS  TN HI N+   N
Sbjct: 81  LMNSINSIQTLGNVNISNSTNVHIGNVTNIN 111


>AF313391-1|AAG32064.1|  345|Drosophila melanogaster
           peptidoglycan-recognition protein-LE protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -3

Query: 432 LVNQANAVQ---NTNISYETNTHIYNLKKFN 349
           L+N  N++Q   N NIS  TN HI N+   N
Sbjct: 81  LMNSINSIQTLGNVNISNSTNVHIGNVTNIN 111


>AE014298-2234|AAF48519.1|  345|Drosophila melanogaster CG8995-PA
           protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -3

Query: 432 LVNQANAVQ---NTNISYETNTHIYNLKKFN 349
           L+N  N++Q   N NIS  TN HI N+   N
Sbjct: 81  LMNSINSIQTLGNVNISNSTNVHIGNVTNIN 111


>AY094943-1|AAM11296.1|  469|Drosophila melanogaster RH56938p
           protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
 Frame = +1

Query: 148 DINNQMIQKN--ILTLCAPIK----FIIQDLSTVKG*NYKYNLFNSQMRCL*LLVFVFKC 309
           ++ ++MI++N  +  LCAP++    + ++ L       +K NL  S + C  L   +  C
Sbjct: 86  EVLDKMIKQNSQMFDLCAPMRGCPAYHVRHLFMEGDHKFKDNLGKSDVHCFLLTDLLLVC 145

Query: 310 NTFEMRGI 333
            T   RG+
Sbjct: 146 KTIAKRGL 153


>AE014296-3283|AAF49064.2| 1029|Drosophila melanogaster CG7323-PA
           protein.
          Length = 1029

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
 Frame = +1

Query: 148 DINNQMIQKN--ILTLCAPIK----FIIQDLSTVKG*NYKYNLFNSQMRCL*LLVFVFKC 309
           ++ ++MI++N  +  LCAP++    + ++ L       +K NL  S + C  L   +  C
Sbjct: 646 EVLDKMIKQNSQMFDLCAPMRGCPAYHVRHLFMEGDHKFKDNLGKSDVHCFLLTDLLLVC 705

Query: 310 NTFEMRGI 333
            T   RG+
Sbjct: 706 KTIAKRGL 713


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,631,014
Number of Sequences: 53049
Number of extensions: 381793
Number of successful extensions: 739
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)