Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306E02f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5UPQ4 Cluster: Putative ankyrin repeat protein L764; n...    36   0.74 
UniRef50_UPI00006CEBDC Cluster: hypothetical protein TTHERM_0037...    34   2.3  
UniRef50_Q54R95 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_Q8IJL2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q5HW89 Cluster: Membrane protein, putative; n=11; Campy...    32   6.9  
UniRef50_A5K1Y0 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_Q5UPQ4 Cluster: Putative ankyrin repeat protein L764; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Putative ankyrin
           repeat protein L764 - Mimivirus
          Length = 647

 Score = 35.5 bits (78), Expect = 0.74
 Identities = 21/86 (24%), Positives = 38/86 (44%)
 Frame = +2

Query: 50  KEYYCENSTENN*FPS*MCSNNVELNSINSFFRQ*NMNPCLVESSMIINFNNKIDLEQLF 229
           K+YY      NN     +C N+ E+N +N+F  +   N C+     +++ N  IDL  +F
Sbjct: 376 KKYYKNILLTNNVTILDLCLNHCEINDVNNFILKIIENDCIETLKYLVDNNYNIDLLDMF 435

Query: 230 NTFHGICNTNAEKQSLCPNNYENSFI 307
                    N  ++ +C     N+ +
Sbjct: 436 QIMVKKNYYNPIRKYICEQIKNNNLL 461


>UniRef50_UPI00006CEBDC Cluster: hypothetical protein TTHERM_00375180;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00375180 - Tetrahymena thermophila SB210
          Length = 1961

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = +2

Query: 107  SNNVELNSINSFFR---Q*NMNPCLVESSMIINFNNKIDL 217
            S N +LN++NS FR   + N NP  +ES+ I+    K+D+
Sbjct: 1676 SKNGDLNTLNSSFRSNSKTNYNPHFIESNQIVTLKQKVDI 1715


>UniRef50_Q54R95 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1128

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 29/83 (34%), Positives = 38/83 (45%)
 Frame = +2

Query: 59  YCENSTENN*FPS*MCSNNVELNSINSFFRQ*NMNPCLVESSMIINFNNKIDLEQLFNTF 238
           Y  N+  NN   +   +NN   N+ N+     N N C+V  S IIN NNK D     N+ 
Sbjct: 66  YNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCIVGESNIIN-NNKDDYNSNNNS- 123

Query: 239 HGICNTNAEKQSLCPNNYENSFI 307
               N N  ++S   NN  NS I
Sbjct: 124 --TINYNIVRESNSNNNSNNSNI 144


>UniRef50_Q8IJL2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 2405

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = +2

Query: 68  NSTENN*FPS*MCSNNVELNSINSFFRQ*NMNPCLVESSMIINFNNKI 211
           NS  NN  P    +NN+ +NSIN+     ++N   V  S + N NNK+
Sbjct: 620 NSINNN-IPMNSINNNIPMNSINNNIHMNSINNINVGMSYVNNMNNKM 666


>UniRef50_Q5HW89 Cluster: Membrane protein, putative; n=11;
           Campylobacter|Rep: Membrane protein, putative -
           Campylobacter jejuni (strain RM1221)
          Length = 190

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -2

Query: 121 FHII*AHS-AGELIILCGVFAVVFLSLNIWLSVLEYCHTK 5
           +HII A     E  I  G+FA++FL+L+I  S+L++  TK
Sbjct: 23  YHIIKAFDFVKEAYIYTGIFALIFLNLSILFSLLKFKKTK 62


>UniRef50_A5K1Y0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1674

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 360 TMSKVTVIYFFYCFECLNSKH*SNI*EKNNLNSKMFSTLCAI 485
           T+  +  +Y  YCF+     H SN+ ++N+LN  M + L  +
Sbjct: 335 TIYDINHVYLLYCFDKKLEAHRSNLPQQNSLNENMLAYLAHV 376


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,236,386
Number of Sequences: 1657284
Number of extensions: 8387956
Number of successful extensions: 21003
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20980
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)