Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306E02f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031227-1|AAH31227.2|  452|Homo sapiens WDR88 protein protein.        30   4.3  
AK131444-1|BAD18589.1|  472|Homo sapiens protein ( Homo sapiens ...    30   4.3  
BX120002-11|CAI95569.2|  516|Homo sapiens zinc finger protein 57...    29   7.5  
AL929591-11|CAI41919.2|  516|Homo sapiens zinc finger protein 57...    29   7.5  
AL669813-1|CAI17624.2|  516|Homo sapiens zinc finger protein 57 ...    29   7.5  
AL645936-20|CAI18028.2|  516|Homo sapiens zinc finger protein 57...    29   7.5  
AL050328-8|CAB89275.2|  452|Homo sapiens chromosome 6 open readi...    29   7.5  

>BC031227-1|AAH31227.2|  452|Homo sapiens WDR88 protein protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 161 SYSTA*KNCLLSLIPHYLSTFSWGINYSLWS 69
           ++S A  NC  +   H+L T SW  N  +W+
Sbjct: 297 AHSNAISNCCFTFSGHFLCTSSWDKNLKIWN 327


>AK131444-1|BAD18589.1|  472|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16579 fis, clone TESTI2049956, weakly  similar
           to Vegetatible incompatibility protein HET-E-1. ).
          Length = 472

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 161 SYSTA*KNCLLSLIPHYLSTFSWGINYSLWS 69
           ++S A  NC  +   H+L T SW  N  +W+
Sbjct: 271 AHSNAISNCCFTFSGHFLCTSSWDKNLKIWN 301


>BX120002-11|CAI95569.2|  516|Homo sapiens zinc finger protein 57
           homolog (mouse) protein.
          Length = 516

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
 Frame = +3

Query: 312 KSRQYGVFCCCPHHSLTMSKVTVIYFF----------YCFECLNS-KH*SNI*EKNNLNS 458
           K  +  VFCC PH SLT SK + +             YCF C  S    S +      + 
Sbjct: 357 KPSRLNVFCC-PHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHW 415

Query: 459 KMFSTLCAIC 488
           K  S LC IC
Sbjct: 416 KQKSYLCPIC 425


>AL929591-11|CAI41919.2|  516|Homo sapiens zinc finger protein 57
           homolog (mouse) protein.
          Length = 516

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
 Frame = +3

Query: 312 KSRQYGVFCCCPHHSLTMSKVTVIYFF----------YCFECLNS-KH*SNI*EKNNLNS 458
           K  +  VFCC PH SLT SK + +             YCF C  S    S +      + 
Sbjct: 357 KPSRLNVFCC-PHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHW 415

Query: 459 KMFSTLCAIC 488
           K  S LC IC
Sbjct: 416 KQKSYLCPIC 425


>AL669813-1|CAI17624.2|  516|Homo sapiens zinc finger protein 57
           homolog (mouse) protein.
          Length = 516

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
 Frame = +3

Query: 312 KSRQYGVFCCCPHHSLTMSKVTVIYFF----------YCFECLNS-KH*SNI*EKNNLNS 458
           K  +  VFCC PH SLT SK + +             YCF C  S    S +      + 
Sbjct: 357 KPSRLNVFCC-PHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHW 415

Query: 459 KMFSTLCAIC 488
           K  S LC IC
Sbjct: 416 KQKSYLCPIC 425


>AL645936-20|CAI18028.2|  516|Homo sapiens zinc finger protein 57
           homolog (mouse) protein.
          Length = 516

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
 Frame = +3

Query: 312 KSRQYGVFCCCPHHSLTMSKVTVIYFF----------YCFECLNS-KH*SNI*EKNNLNS 458
           K  +  VFCC PH SLT SK + +             YCF C  S    S +      + 
Sbjct: 357 KPSRLNVFCC-PHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHW 415

Query: 459 KMFSTLCAIC 488
           K  S LC IC
Sbjct: 416 KQKSYLCPIC 425


>AL050328-8|CAB89275.2|  452|Homo sapiens chromosome 6 open reading
           frame 40 protein.
          Length = 452

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
 Frame = +3

Query: 312 KSRQYGVFCCCPHHSLTMSKVTVIYFF----------YCFECLNS-KH*SNI*EKNNLNS 458
           K  +  VFCC PH SLT SK + +             YCF C  S    S +      + 
Sbjct: 293 KPSRLNVFCC-PHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHW 351

Query: 459 KMFSTLCAIC 488
           K  S LC IC
Sbjct: 352 KQKSYLCPIC 361


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,415,519
Number of Sequences: 237096
Number of extensions: 1233394
Number of successful extensions: 5552
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5552
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)