Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306E01f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 27 0.13
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 25 0.41
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 21 5.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 8.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 8.7
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 8.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 26.6 bits (56), Expect = 0.13
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -1
Query: 203 IILILPLFAICHCLFNTKVLFTDTAF*YFIVLNLHIICQHYFL*QN*MITCCFWVVTIY 27
II + L C + + + AF F V L ++C +YF + + C F + T++
Sbjct: 220 IIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMH 278
Score = 22.2 bits (45), Expect = 2.9
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 201 YINFTIVCNLPLFI*HQSFIYRYCVLIFYRS--KFTHNLPTLFFMTKLNDNLLFLGCHY 31
+I FT+ L + + +FI CV FY + FT +L L + L FL C Y
Sbjct: 89 FIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIY 147
Score = 20.6 bits (41), Expect = 8.7
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = -1
Query: 185 LFAICHCLFNTKVLFTDTAF*YFIVLNLHIICQHYFL*QN*MITCCFWVVTIYHRYRTY 9
L +C F L AF F + L ++C +YF ++ C ++ + + T+
Sbjct: 253 LLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPTH 311
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 25.0 bits (52), Expect = 0.41
Identities = 11/55 (20%), Positives = 27/55 (49%)
Frame = +1
Query: 103 KFRTIKY*NAVSVNKTLVLNKQWQIANNGKINIMQRWFFLEERKIQKTKPERKMS 267
KF+T++ N + K+W++A N + Q + + R+++ K ++ +
Sbjct: 252 KFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQRQA 306
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.4 bits (43), Expect = 5.0
Identities = 5/13 (38%), Positives = 11/13 (84%)
Frame = -1
Query: 185 LFAICHCLFNTKV 147
+F+ C+C +N+K+
Sbjct: 269 VFSFCYCYYNSKM 281
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 418 MDYDEASNLWLKTLTIPNTCEVLYRYA 498
+ YD+ + WL TL + V Y A
Sbjct: 573 VQYDQGEDRWLCTLLLQRGYRVEYSAA 599
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 418 MDYDEASNLWLKTLTIPNTCEVLYRYA 498
+ YD+ + WL TL + V Y A
Sbjct: 833 VQYDQGEDRWLCTLLLQRGYRVEYSAA 859
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 418 MDYDEASNLWLKTLTIPNTCEVLYRYA 498
+ YD+ + WL TL + V Y A
Sbjct: 833 VQYDQGEDRWLCTLLLQRGYRVEYSAA 859
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 418 MDYDEASNLWLKTLTIPNTCEVLYRYA 498
+ YD+ + WL TL + V Y A
Sbjct: 806 VQYDQGEDRWLCTLLLQRGYRVEYSAA 832
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 418 MDYDEASNLWLKTLTIPNTCEVLYRYA 498
+ YD+ + WL TL + V Y A
Sbjct: 806 VQYDQGEDRWLCTLLLQRGYRVEYSAA 832
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 418 MDYDEASNLWLKTLTIPNTCEVLYRYA 498
+ YD+ + WL TL + V Y A
Sbjct: 833 VQYDQGEDRWLCTLLLQRGYRVEYSAA 859
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 418 MDYDEASNLWLKTLTIPNTCEVLYRYA 498
+ YD+ + WL TL + V Y A
Sbjct: 833 VQYDQGEDRWLCTLLLQRGYRVEYSAA 859
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,547
Number of Sequences: 336
Number of extensions: 2771
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -