Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306E01f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g06700.1 68414.m00712 serine/threonine protein kinase, putati... 31 0.47
At3g07600.1 68416.m00910 heavy-metal-associated domain-containin... 30 1.1
At4g33390.1 68417.m04746 hypothetical protein contains Pfam prof... 29 1.4
At2g04270.1 68415.m00416 glycoside hydrolase starch-binding doma... 29 1.9
At2g32320.1 68415.m03951 expressed protein contains Pfam profil... 29 2.5
At2g30740.1 68415.m03749 serine/threonine protein kinase, putati... 29 2.5
At3g55110.1 68416.m06120 ABC transporter family protein ATP-bind... 28 3.3
At3g47910.1 68416.m05224 expressed protein low similarity to non... 28 3.3
At5g53930.1 68418.m06710 expressed protein 28 4.4
At5g54890.1 68418.m06837 expressed protein 27 5.8
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 27 5.8
At5g05570.1 68418.m00605 transducin family protein / WD-40 repea... 27 5.8
At5g57040.1 68418.m07120 lactoylglutathione lyase family protein... 27 7.7
At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N domain-... 27 7.7
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 27 7.7
>At1g06700.1 68414.m00712 serine/threonine protein kinase, putative
similar to Pto kinase interactor 1 (Pti1)[Lycopersicon
esculentum] gi|3668069|gb|AAC61805
Length = 361
Score = 31.1 bits (67), Expect = 0.47
Identities = 19/81 (23%), Positives = 35/81 (43%)
Frame = +1
Query: 238 QKTKPERKMSEPEPEQKAELISQQWQFSVTVPDINPIKEKVFVTGNTPELGEWDYTKIIM 417
Q++ K S+P P K E+ + V ++ +KEK G+ +GE Y ++
Sbjct: 25 QQSDANHKNSKPAPVAKHEVKKEALPIEVPPLSLDEVKEKTENFGSKALIGEGSYGRVYY 84
Query: 418 MDYDEASNLWLKTLTIPNTCE 480
++ + LK L + E
Sbjct: 85 ATLNDGVAVALKKLDVAPEAE 105
>At3g07600.1 68416.m00910 heavy-metal-associated domain-containing
protein identical to residues 23 to 179 of farnesylated
protein ATFP4 (putative metal-binding protein)
GB:AAD09508 [Arabidopsis thaliana]; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 157
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 223 EERKIQKTKPERKMSEP--EPEQKAELISQQW 312
EE+K ++ KPE K EP +P QK E Q W
Sbjct: 91 EEKKPEEKKPEEKKPEPCCQPWQKPEPCYQPW 122
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 223 EERKIQKTKPERKMSEPEPEQKAELISQQWQ 315
EE+K ++ KPE K +PE E+K E Q WQ
Sbjct: 86 EEKKPEEKKPEEK--KPE-EKKPEPCCQPWQ 113
>At4g33390.1 68417.m04746 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 779
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 178 ANNGKINIMQ---RWFFLEERKIQKTKPERKMSEPEPEQKAELISQQWQFSVTVPDINPI 348
A GK+ + Q +W + E+K + K + E++AE + +P +NP+
Sbjct: 699 AKEGKLGVEQELRKWREVSEKKRKNGSSHGKSIQGSKEKEAETSVSNETETNPIPQVNPV 758
Query: 349 KEK 357
K+K
Sbjct: 759 KKK 761
>At2g04270.1 68415.m00416 glycoside hydrolase starch-binding
domain-containing protein contains Pfam profile: PF00686
starch binding domain
Length = 996
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 352 EKVFVTGNTPELGEWDYTKIIMMDYDEASNLWLKTLTIPNTCEVLYRYAI 501
E ++VTG+ LG W+ I M E N W + I + Y Y +
Sbjct: 91 EHLYVTGDPSTLGSWEPDCAISMYPTENDNEWEAKVKIASGVNFRYNYLL 140
>At2g32320.1 68415.m03951 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 243
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -1
Query: 194 ILP-LFAICHCLFNTKVLFTDTAF*YFIVLNLHIIC 90
+LP LF CLF TKV+F+ +F YF+ + +++C
Sbjct: 200 MLPVLFRQGSCLFKTKVIFSIISFFYFLA-SEYLLC 234
>At2g30740.1 68415.m03749 serine/threonine protein kinase, putative
similar to Pto kinase interactor 1 (Pti1)[Lycopersicon
esculentum] gi|3668069|gb|AAC61805
Length = 366
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/81 (20%), Positives = 34/81 (41%)
Frame = +1
Query: 238 QKTKPERKMSEPEPEQKAELISQQWQFSVTVPDINPIKEKVFVTGNTPELGEWDYTKIIM 417
Q ++ +K +P+ K E + V ++ +KEK G+ +GE Y ++
Sbjct: 28 QNSEANQKNQKPQAVVKPEAQKEALPIEVPPLSVDEVKEKTDNFGSKSLIGEGSYGRVYY 87
Query: 418 MDYDEASNLWLKTLTIPNTCE 480
++ + LK L + E
Sbjct: 88 ATLNDGKAVALKKLDVAPEAE 108
>At3g55110.1 68416.m06120 ABC transporter family protein ATP-binding
cassette-sub-family G-member 2, Mus musculus,
EMBL:AF140218
Length = 708
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 359 TFSLMGFISGTVTENCHCWEISSAFCSGSGSDIFLSGLVFCIFLS 225
TF +G G + +C I +AF SGS F+SGL+ + +S
Sbjct: 519 TFWTVGLSGGLESFFYYCLIIYAAFWSGSSIVTFISGLIPNVMMS 563
>At3g47910.1 68416.m05224 expressed protein low similarity to
nonmuscle myosin heavy chain (NMHC) [Homo sapiens]
GI:189036; contains Pfam profiles PF04780: Protein of
unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1290
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 223 EERKIQKTKPERKMSEPEPEQKAELISQQWQFSVTVP 333
EERK++KT ++ E E ++K + QQ ++S +VP
Sbjct: 1026 EERKLEKTLEYQRRIEDEAKEK-HMAEQQKKYSSSVP 1061
>At5g53930.1 68418.m06710 expressed protein
Length = 529
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 205 QRWFFLEERKIQKTKPERKMSEPEPEQKAELISQQWQ-FSVTVPDINPIKEKVFV 366
+RW R++ K K R S E E ++E + WQ +P+ NP + K V
Sbjct: 143 KRWSRDRGRRLGKVKDSRSRSRDELEGESEEPDECWQGEDEVIPEKNPRRLKSIV 197
>At5g54890.1 68418.m06837 expressed protein
Length = 358
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +1
Query: 223 EERKIQKTKPERKMSEPEPEQKAELISQ-----QWQFSVTVPDINPI 348
+E+K QKTK + + SE + K +IS ++ +S T P+I PI
Sbjct: 49 KEKKKQKTKKQDQSSELVNDLKIPVISDLPFDFRYSYSETNPEIEPI 95
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 238 QKTKPERKMSEPEPEQKAELISQQ 309
+ TK ERK PE ++KAE + ++
Sbjct: 784 ESTKKERKRKNPESKKKAEAVEEE 807
>At5g05570.1 68418.m00605 transducin family protein / WD-40 repeat
family protein similar to unknown protein (pir||T04661);
contains Pfam PF00400: WD domain, G-beta repeat (4
copies, 2 weak)|8683726|gb|AV524198.1|AV524198
Length = 1124
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 507 ETYGVTI*NFTSIWYC*SFKPKIGSLVIIHH 415
E G+ I ++W C + +GSL++ HH
Sbjct: 577 EKKGLAIVTTLTLWICYALSHAVGSLLVAHH 607
>At5g57040.1 68418.m07120 lactoylglutathione lyase family protein /
glyoxalase I family protein contains Pfam PF00903:
glyoxalase family protein
Length = 197
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 47 NNKLSFNFVIKNNVGKLCVNLER 115
NNK + V ++VG LC NLER
Sbjct: 69 NNKTDYGVVGVHHVGLLCENLER 91
>At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N
domain-containing protein contains Pfam profile PF00627:
UBA/TS-N domain
Length = 646
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 247 KPERKMSEPEPEQKAELISQQW 312
+PE K+ P+P+Q A L ++W
Sbjct: 334 RPELKLDWPKPQQSAALADKRW 355
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 223 EERKIQKTKPERKMSEPEPEQKAELISQQ 309
EE K + P SE +PE+KAE+ +++
Sbjct: 164 EEEKSSEAAPVETKSEEKPEEKAEVTTEK 192
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,885,162
Number of Sequences: 28952
Number of extensions: 216944
Number of successful extensions: 603
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -