Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306D12f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31F10.09c |nut2|med10|mediator complex subunit Med10|Schizos... 56 3e-09
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 29 0.32
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 27 1.3
SPBC19F5.01c |puc1|SPBP8B7.32c|cyclin Puc1|Schizosaccharomyces p... 27 1.7
SPBC1718.05 |trs31||TRAPP complex subunit Trs31 |Schizosaccharom... 27 2.2
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 26 3.0
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 26 3.9
SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11 |Schizosacc... 26 3.9
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 25 5.2
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 25 6.8
SPAC959.10 |sen15||tRNA-splicing endonuclease subunit Sen15|Schi... 25 6.8
SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.8
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 25 6.8
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 25 6.8
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 6.8
SPBPB8B6.06c ||SPAPB8B6.06c, SPAPB8B6.06c|conserved fungal prote... 25 9.0
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 25 9.0
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos... 25 9.0
SPAC977.11 |||conserved fungal protein|Schizosaccharomyces pombe... 25 9.0
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 25 9.0
SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharom... 25 9.0
>SPBC31F10.09c |nut2|med10|mediator complex subunit
Med10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 138
Score = 56.0 bits (129), Expect = 3e-09
Identities = 27/119 (22%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Frame = +1
Query: 133 MSSPLENLETQLEMFIENVRQIRIIVSDFQPQGQS-VLNQKIQSLVTGLQEIDKLKSQVH 309
M+ +++L ++LE + + +IV + + S + + + +L+ L+ + + +V+
Sbjct: 1 MTDEMKSLASRLEDTTQAFYDLALIVYNLEDTTPSDAIPESLDTLIRDLKSLPDISRKVN 60
Query: 310 DIHVPTEVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSYKRFKTHLLSELSKTFP 486
++ +P +V +YI+QGRNP +Y + + N+ V GK+ + + F+ E+ + +P
Sbjct: 61 NL-IPQDVLEYIEQGRNPDVYARQFSELVQKDNQYVNGKLYAIEGFQKAFAEEIKQAYP 118
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 29.5 bits (63), Expect = 0.32
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 130 SMSSPLENLETQLEMFIENVRQIRIIV--SDFQPQGQSVLNQKIQSLVTGLQEIDKLKSQ 303
S+S E E+QLE E +Q+R+ D Q L++K++ L L+ DKL +
Sbjct: 45 SLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRE 104
Query: 304 VHDIHVPTEV 333
+ T+V
Sbjct: 105 TTEKMRQTDV 114
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 319 VPTEVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSYKRFKTHLLSELSKTFPNEIT 498
V +E+ + I++ +NP + C+ + +E + ID+ F T+ ++ + KT NE +
Sbjct: 204 VVSEILELIEKSKNPSILVDACVSR-FHIQQETQDFIDA-THFPTY-VTPMGKTAINESS 260
Query: 499 KY 504
Y
Sbjct: 261 PY 262
>SPBC19F5.01c |puc1|SPBP8B7.32c|cyclin Puc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 359
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 288 VNLLQSSH*GLNFLIQYTLPLRLKITDDYTNLSHIFNEHFKL 163
VN + H G + I TLPL + + D Y + ++ +H +L
Sbjct: 133 VNFIVEIHNGFDLSID-TLPLSISLMDSYVSRRVVYCKHIQL 173
>SPBC1718.05 |trs31||TRAPP complex subunit Trs31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 209
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 235 SVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDYID-QGRNPQLYTK 378
S L Q+IQS V+G+QE ++ K H V ++ + + + RNP+ T+
Sbjct: 51 SELIQRIQSQVSGIQEFEE-KLNEHGYRVGQKLVELVVWRERNPKRETR 98
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 26.2 bits (55), Expect = 3.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 379 DCIDKALAKNEEVKGKIDSYK 441
DC+D + +NE+VK + YK
Sbjct: 23 DCLDNGVEENEQVKNLLKLYK 43
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 25.8 bits (54), Expect = 3.9
Identities = 23/117 (19%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Frame = +1
Query: 148 ENLETQLEMFIENVRQIRIIVSDFQPQ-GQSVLNQKIQSLVTGLQEID----KLKSQVHD 312
++++ LE + +IR + D++ G+ ++ + G++E ++K ++
Sbjct: 963 QDMKEYLEAGLVGTEKIRKFIVDYESHHGEGNVHFNVTLTEAGMKEALNESLEVKFKLSR 1022
Query: 313 IHVPTEVFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSYKRFKTHLLSELSKTF 483
+ + + GR + D ++ L + EV+ + +Y+R K H+++EL K F
Sbjct: 1023 TQATSNMIAFDASGR---IKKYDSVEDILTEFYEVR--LRTYQRRKEHMVNELEKRF 1074
>SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1284
Score = 25.8 bits (54), Expect = 3.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 259 SLVTGLQEIDKLKSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKALAK 405
S++ L +DK+K +HD T+ FD + R P + K + L++
Sbjct: 150 SILNSLDNLDKVKYLLHDSSSLTKAFDSYKEKR-PSIVEKFPLHNLLSR 197
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 331 VFDYIDQGRNPQLYTKDCIDKALAKNEEVKGKIDSYKR 444
VFD+ + T C+D + +N++ + D+ KR
Sbjct: 189 VFDFRSYNIKATVRTISCVDLLIGENQDAENTADTSKR 226
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 237 TLPLRLKITDDYTNLSHIFNEHFKLSF 157
T+P+ T + N+S FNEH L+F
Sbjct: 6 TIPITPTRTPCFFNISSSFNEHSPLNF 32
>SPAC959.10 |sen15||tRNA-splicing endonuclease subunit
Sen15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 143
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 246 IQYTLPLRLKITDDYTNLSHIFNEHFKLSFKI 151
+QY LPL L+ T LS +F+ KLS +
Sbjct: 69 LQYVLPLYLQETISIEFLSSVFDSMKKLSLPL 100
>SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 477
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 316 HVPTEVFDYIDQGRNPQLYTKDCID-KALAKNEEV-KGKIDSYKRFKT 453
H P +F I+ N YT D +D AL +N + K + S + F+T
Sbjct: 200 HSPLVMFQAINPYLNNNYYTHDTVDTNALEENSWITKLDMQSLQHFRT 247
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 397 MLYLCSPLCRAVGYGLDQYNQRLLLVHGYHELVTSICQSP 278
+L CS + L NQRL + G+ ++VT I SP
Sbjct: 296 ILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSP 335
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 334 FDYIDQGRNPQLYTKDCIDKALAKNEEVKGK 426
++Y +G+ ++Y + ID + NEE KGK
Sbjct: 599 WEYRMEGQFLEIYNETIIDLLASGNEEEKGK 629
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.0 bits (52), Expect = 6.8
Identities = 21/95 (22%), Positives = 42/95 (44%)
Frame = +1
Query: 193 QIRIIVSDFQPQGQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDYIDQGRNPQLY 372
Q+ +VS + + +S LN+K LV +EI + + Q+H E I+ ++ L
Sbjct: 1047 QLASLVSKYS-ETESELNKKEAELVIFQKEITEYRDQLHKAFQNPEKTHNINDVKSGPLN 1105
Query: 373 TKDCIDKALAKNEEVKGKIDSYKRFKTHLLSELSK 477
+ + I + + + K T ++LS+
Sbjct: 1106 SDENIYSTSSTTLSILKDVQELKSLHTKEANQLSE 1140
>SPBPB8B6.06c ||SPAPB8B6.06c, SPAPB8B6.06c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -2
Query: 439 CMNQF---FLSPLHF*PMLYLCSPLCRAVGYGL 350
C N F LS ++ P + C+P+ R+V YG+
Sbjct: 221 CANVFATLLLSIMYMIPQITHCTPVSRSVMYGI 253
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 72 KNFRTAYRYFITRINLNKEQHVVSFRKS 155
K+++TA YF I L++ H++ +S
Sbjct: 16 KDYKTAIDYFTQAIGLDERNHILYSNRS 43
>SPBP35G2.05c |cki2||serine/threonine protein kinase
Cki2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 400 AKNEEVKGKIDSYKRFKTHLLSELSKTFPNEITKY 504
A N+ KI K+ + +SEL FPNE +KY
Sbjct: 224 ANNKHKYEKISEKKQSTS--ISELCAGFPNEFSKY 256
>SPAC977.11 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 311
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -2
Query: 439 CMNQF---FLSPLHF*PMLYLCSPLCRAVGYGL 350
C N F LS ++ P + C+P+ R+V YG+
Sbjct: 221 CANVFATLLLSIMYMIPQITHCTPVSRSVMYGI 253
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 269 LDCRRLTN*SHKFMISMYQQKSLIILIKAVTHS 367
L+C +L N + + S Y+Q++ LIK ++H+
Sbjct: 670 LECNKLENRVYDLVRSSYEQRN--FLIKKISHA 700
>SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 892
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 226 QGQSVLNQKIQSLVTGLQEIDKLKSQVHDIHVPTEVFDYIDQGRNPQLYTKDCIDKAL 399
QG ++ +QSL +EID L++ VH H ++ + P +Y + I K +
Sbjct: 397 QGIEEQDEFLQSL--SQEEIDDLRAMVHSDH----IYSRLTNSLAPSVYGHEIIKKGI 448
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,957,370
Number of Sequences: 5004
Number of extensions: 38313
Number of successful extensions: 125
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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