Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.2  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 295  KSQVHDIHVPTEV 333
            K+Q+H+IH P  V
Sbjct: 2026 KNQIHEIHYPVSV 2038


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 295  KSQVHDIHVPTEV 333
            K+Q+H+IH P  V
Sbjct: 2027 KNQIHEIHYPVSV 2039


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 229  GQSVLNQKIQSLVTGLQEIDKL 294
            G+  LN+ ++ L   LQE+ KL
Sbjct: 1098 GEKTLNEILRELEARLQEVQKL 1119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,964
Number of Sequences: 2352
Number of extensions: 8753
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)