Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D11f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   0.71 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.94 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.94 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.94 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.94 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   5.0  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 424 CLKRLQKCSSKNQGQQEMYMLA 489
           C K ++K   ++  QQE+YM A
Sbjct: 309 CYKLMEKFPERSHEQQELYMAA 330


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 520 LVPQECQTWI*PTCTSLVDLDFCWNTSAVF*DIPIHIMLGKLK 392
           ++ Q    WI P    LV L +  N  +    IP    LGK+K
Sbjct: 246 IIEQRADLWIIPIAIFLVSLGWWENYISRHSPIPFIKKLGKIK 288


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 520 LVPQECQTWI*PTCTSLVDLDFCWNTSAVF*DIPIHIMLGKLK 392
           ++ Q    WI P    LV L +  N  +    IP    LGK+K
Sbjct: 246 IIEQRADLWIIPIAIFLVSLGWWENYISRHSPIPFIKKLGKIK 288


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 520 LVPQECQTWI*PTCTSLVDLDFCWNTSAVF*DIPIHIMLGKLK 392
           ++ Q    WI P    LV L +  N  +    IP    LGK+K
Sbjct: 246 IIEQRADLWIIPIAIFLVSLGWWENYISRHSPIPFIKKLGKIK 288


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 520 LVPQECQTWI*PTCTSLVDLDFCWNTSAVF*DIPIHIMLGKLK 392
           ++ Q    WI P    LV L +  N  +    IP    LGK+K
Sbjct: 246 IIEQRADLWIIPIAIFLVSLGWWENYISRHSPIPFIKKLGKIK 288


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 318 YYIQLNIGARWGGASERSSK 259
           Y + L++ A WGG +  S+K
Sbjct: 313 YKLWLHVDAAWGGGALVSAK 332


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 387 QSFNLPNIICIGMSQKTAEVFQQKSRSTRD 476
           ++FN+P+I+      K  E+   K   T D
Sbjct: 576 KNFNIPSILQFNDGLKNLEIHVTKDTDTLD 605


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,968
Number of Sequences: 336
Number of extensions: 1657
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)