Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306D11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR407667-1|CAG28595.1| 178|Homo sapiens ARPC3 protein. 155 7e-38
BC078162-1|AAH78162.1| 178|Homo sapiens actin related protein 2... 155 7e-38
BC067747-1|AAH67747.1| 178|Homo sapiens actin related protein 2... 155 7e-38
AF006086-1|AAB64191.1| 178|Homo sapiens p21-Arc protein. 155 7e-38
AF004561-1|AAB61466.1| 178|Homo sapiens p21-Arc protein. 155 7e-38
DQ328220-1|ABC59627.1| 178|Homo sapiens actin related protein 2... 155 1e-37
BC117288-1|AAI17289.1| 317|Homo sapiens tumor necrosis factor (... 29 9.9
BC117286-1|AAI17287.1| 317|Homo sapiens tumor necrosis factor (... 29 9.9
BC074890-1|AAH74890.1| 317|Homo sapiens tumor necrosis factor (... 29 9.9
BC074823-1|AAH74823.1| 317|Homo sapiens tumor necrosis factor (... 29 9.9
AL139382-2|CAI16926.1| 317|Homo sapiens tumor necrosis factor (... 29 9.9
AL139382-1|CAM23721.1| 244|Homo sapiens tumor necrosis factor (... 29 9.9
AF053712-1|AAC39731.1| 317|Homo sapiens osteoprotegerin ligand ... 29 9.9
AF019047-1|AAB86811.1| 317|Homo sapiens RANKL protein. 29 9.9
AF013171-1|AAC51762.1| 245|Homo sapiens TRANCE protein. 29 9.9
AB064270-1|BAB79695.1| 270|Homo sapiens receptor activator of n... 29 9.9
AB064269-1|BAB79694.1| 317|Homo sapiens receptor activator of n... 29 9.9
AB064268-1|BAB79693.1| 244|Homo sapiens receptor activator of n... 29 9.9
AB061227-1|BAB71768.1| 270|Homo sapiens hRANKL 2 protein. 29 9.9
AB037599-1|BAA90488.1| 244|Homo sapiens sODF/TRANCE protein. 29 9.9
>CR407667-1|CAG28595.1| 178|Homo sapiens ARPC3 protein.
Length = 178
Score = 155 bits (377), Expect = 7e-38
Identities = 69/110 (62%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
Frame = +1
Query: 193 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 369
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 370 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEP 519
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY L I+ F IPGEP
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEP 109
>BC078162-1|AAH78162.1| 178|Homo sapiens actin related protein 2/3
complex, subunit 3, 21kDa protein.
Length = 178
Score = 155 bits (377), Expect = 7e-38
Identities = 69/110 (62%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
Frame = +1
Query: 193 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 369
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 370 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEP 519
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY L I+ F IPGEP
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEP 109
>BC067747-1|AAH67747.1| 178|Homo sapiens actin related protein 2/3
complex, subunit 3, 21kDa protein.
Length = 178
Score = 155 bits (377), Expect = 7e-38
Identities = 69/110 (62%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
Frame = +1
Query: 193 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 369
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 370 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEP 519
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY L I+ F IPGEP
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEP 109
>AF006086-1|AAB64191.1| 178|Homo sapiens p21-Arc protein.
Length = 178
Score = 155 bits (377), Expect = 7e-38
Identities = 69/110 (62%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
Frame = +1
Query: 193 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 369
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 370 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEP 519
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY L I+ F IPGEP
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEP 109
>AF004561-1|AAB61466.1| 178|Homo sapiens p21-Arc protein.
Length = 178
Score = 155 bits (377), Expect = 7e-38
Identities = 69/110 (62%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
Frame = +1
Query: 193 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 369
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 370 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEP 519
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY L I+ F IPGEP
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEP 109
>DQ328220-1|ABC59627.1| 178|Homo sapiens actin related protein 2/3
complex protein.
Length = 178
Score = 155 bits (375), Expect = 1e-37
Identities = 68/110 (61%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
Frame = +1
Query: 193 MPAYHSTLTDY-SQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYE 369
MPAYHS+L D ++ +GN+A+LP+R+ F+GPAP + + DI+DEA+ YFKANVFF+ YE
Sbjct: 1 MPAYHSSLMDPDTKLIGNMALLPIRSQFKGPAPRETK-DTDIVDEAIYYFKANVFFKNYE 59
Query: 370 IKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKFDIPGEP 519
IK++ADR LIY+TLY+SECLK+LQKC+SK+QG++EMY + I+ F IPGEP
Sbjct: 60 IKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTMGITNFPIPGEP 109
>BC117288-1|AAI17289.1| 317|Homo sapiens tumor necrosis factor
(ligand) superfamily, member 11 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 200 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 259
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 260 STKYWSGNSEF 270
>BC117286-1|AAI17287.1| 317|Homo sapiens tumor necrosis factor
(ligand) superfamily, member 11 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 200 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 259
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 260 STKYWSGNSEF 270
>BC074890-1|AAH74890.1| 317|Homo sapiens tumor necrosis factor
(ligand) superfamily, member 11 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 200 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 259
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 260 STKYWSGNSEF 270
>BC074823-1|AAH74823.1| 317|Homo sapiens tumor necrosis factor
(ligand) superfamily, member 11 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 200 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 259
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 260 STKYWSGNSEF 270
>AL139382-2|CAI16926.1| 317|Homo sapiens tumor necrosis factor
(ligand) superfamily, member 11 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 200 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 259
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 260 STKYWSGNSEF 270
>AL139382-1|CAM23721.1| 244|Homo sapiens tumor necrosis factor
(ligand) superfamily, member 11 protein.
Length = 244
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 127 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 186
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 187 STKYWSGNSEF 197
>AF053712-1|AAC39731.1| 317|Homo sapiens osteoprotegerin ligand
protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 200 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 259
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 260 STKYWSGNSEF 270
>AF019047-1|AAB86811.1| 317|Homo sapiens RANKL protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 200 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 259
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 260 STKYWSGNSEF 270
>AF013171-1|AAC51762.1| 245|Homo sapiens TRANCE protein.
Length = 245
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 128 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 187
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 188 STKYWSGNSEF 198
>AB064270-1|BAB79695.1| 270|Homo sapiens receptor activator of
nuclear factor kappa B ligand 2-2 protein.
Length = 270
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 153 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 212
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 213 STKYWSGNSEF 223
>AB064269-1|BAB79694.1| 317|Homo sapiens receptor activator of
nuclear factor kappa B ligand 1 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 200 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 259
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 260 STKYWSGNSEF 270
>AB064268-1|BAB79693.1| 244|Homo sapiens receptor activator of
nuclear factor kappa B ligand 3 protein.
Length = 244
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 127 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 186
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 187 STKYWSGNSEF 197
>AB061227-1|BAB71768.1| 270|Homo sapiens hRANKL 2 protein.
Length = 270
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 153 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 212
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 213 STKYWSGNSEF 223
>AB037599-1|BAA90488.1| 244|Homo sapiens sODF/TRANCE protein.
Length = 244
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 289 TSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQ 468
T S+ +L + + Y AN+ FR +E D + L +YV++ ++ + +G
Sbjct: 127 TFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGG 186
Query: 469 QEMYMLAISKF 501
Y S+F
Sbjct: 187 STKYWSGNSEF 197
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,413,610
Number of Sequences: 237096
Number of extensions: 907259
Number of successful extensions: 1434
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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