Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D11f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032626-1|CAA21538.1|  183|Caenorhabditis elegans Hypothetical ...   110   5e-25
Z83113-2|CAB05544.1|  479|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AL023828-3|CAA19468.1|  572|Caenorhabditis elegans Hypothetical ...    29   2.0  
AL023828-2|CAA19449.1|  570|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z78200-5|CAB01584.2|  512|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z77661-2|CAB01184.4|  265|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AL023828-4|CAA19469.1|  462|Caenorhabditis elegans Hypothetical ...    28   4.7  

>AL032626-1|CAA21538.1|  183|Caenorhabditis elegans Hypothetical
           protein Y37D8A.1 protein.
          Length = 183

 Score =  110 bits (265), Expect = 5e-25
 Identities = 56/113 (49%), Positives = 78/113 (69%), Gaps = 5/113 (4%)
 Frame = +1

Query: 193 MPAYHSTLTDYSQTVG----NLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFR 360
           MPAYHS      + +     N+  LP+RT+F+GPAP ++  + DIIDEAL YFK N+FFR
Sbjct: 1   MPAYHSKFDTELKVLPLGNTNMGKLPIRTNFKGPAPQTN--QDDIIDEALTYFKPNIFFR 58

Query: 361 FYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISK-FDIPGE 516
            +EIK  ADR +IYL  Y++ECL++LQK  +K  GQ++++ LA+S    IPGE
Sbjct: 59  EFEIKGPADRTMIYLIFYITECLRKLQKSPNKIAGQKDLHALALSHLLPIPGE 111


>Z83113-2|CAB05544.1|  479|Caenorhabditis elegans Hypothetical
           protein K08H10.4 protein.
          Length = 479

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 207 FNVN*LQSNSWESCNLTTSNFVQRPRPNELR 299
           +N+N   S+S+ESC  TT NFV+      LR
Sbjct: 297 WNINGSSSHSFESCYGTTKNFVESSEIMHLR 327


>AL023828-3|CAA19468.1|  572|Caenorhabditis elegans Hypothetical
           protein Y17G7B.2b protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +1

Query: 202 YHSTLTDYSQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNY--FKANVFFRFYEIK 375
           YH         +G L  LP+    + PA   S+  L +  +  N   FKAN FF   E  
Sbjct: 396 YHFGGFKQGDVLGCLIHLPVDKKLQIPANLPSEKYLPVSHKGFNLISFKANYFFEVQEES 455

Query: 376 SDADRVLI 399
           +D  + L+
Sbjct: 456 ADIAKTLV 463


>AL023828-2|CAA19449.1|  570|Caenorhabditis elegans Hypothetical
           protein Y17G7B.2a protein.
          Length = 570

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +1

Query: 202 YHSTLTDYSQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNY--FKANVFFRFYEIK 375
           YH         +G L  LP+    + PA   S+  L +  +  N   FKAN FF   E  
Sbjct: 394 YHFGGFKQGDVLGCLIHLPVDKKLQIPANLPSEKYLPVSHKGFNLISFKANYFFEVQEES 453

Query: 376 SDADRVLI 399
           +D  + L+
Sbjct: 454 ADIAKTLV 461


>Z78200-5|CAB01584.2|  512|Caenorhabditis elegans Hypothetical
           protein T04H1.7 protein.
          Length = 512

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +1

Query: 250 ILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYL 405
           +L L ++ +    TS ++ LD ++       + + F FY     +D++L+YL
Sbjct: 440 LLKLSSNLKNAKQTSENLFLDTVESTYTDNLSPLNFEFYPKLYSSDQILLYL 491


>Z77661-2|CAB01184.4|  265|Caenorhabditis elegans Hypothetical
           protein F40G12.2 protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = +1

Query: 319 DEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMY 480
           ++ LN+  ANV    + +  DA+  ++ +     +CL+  +KC  K +  +  Y
Sbjct: 54  EDPLNHQNANVNMSPWGLPYDAECGMVPMVFLEMDCLEPAKKCRQKIENFENKY 107


>AL023828-4|CAA19469.1|  462|Caenorhabditis elegans Hypothetical
           protein Y17G7B.2c protein.
          Length = 462

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +1

Query: 235 VGNLAILPLRTSFRGPAPTSSDIELDIIDEALNY--FKANVFFRFYEIKSDADRVLI 399
           +G L  LP+    + PA   S+  L +  +  N   FKAN FF   E  +D  + L+
Sbjct: 297 LGCLIHLPVDKKLQIPANLPSEKYLPVSHKGFNLISFKANYFFEVQEESADIAKTLV 353


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,568,581
Number of Sequences: 27780
Number of extensions: 157136
Number of successful extensions: 360
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)