Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306D09f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 254 1e-66
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 253 2e-66
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 251 8e-66
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 188 9e-47
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 184 1e-45
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 177 1e-43
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 155 6e-37
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 153 3e-36
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 146 3e-34
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 144 1e-33
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 137 2e-31
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 115 8e-25
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 105 8e-22
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 104 1e-21
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 63 3e-09
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 62 6e-09
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 61 2e-08
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 60 4e-08
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 58 2e-07
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 56 7e-07
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 56 7e-07
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 53 3e-06
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 52 1e-05
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 52 1e-05
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 52 1e-05
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 50 2e-05
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 49 7e-05
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 48 1e-04
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 44 0.002
UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyc... 43 0.005
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 43 0.005
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 43 0.005
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 42 0.009
UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 40 0.035
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 39 0.080
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 38 0.14
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 35 0.98
UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcin... 34 1.7
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa... 33 5.2
UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_A1TZN4 Cluster: Flagellar hook-associated protein FlgK;... 32 6.9
UniRef50_Q3A5C8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_A6UN38 Cluster: Response regulator receiver protein; n=... 32 9.2
UniRef50_A0N0V6 Cluster: Putative regulatory protein; n=2; Azoar... 32 9.2
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 254 bits (621), Expect = 1e-66
Identities = 121/173 (69%), Positives = 136/173 (78%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 180
WKGYV R+ GGNDKQGFPMKQG++TN RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD+
Sbjct: 45 WKGYVFRITGGNDKQGFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDS 104
Query: 181 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPA 360
LSVL+LVIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+YV++R LP
Sbjct: 105 QLSVLSLVIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPE 164
Query: 361 KEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLL 519
KEGK K + KAPKIQRLVTPVVLQ A+YAKLL
Sbjct: 165 KEGK---KAKSKAPKIQRLVTPVVLQRKRKRLALKRQRAQKCKQEAADYAKLL 214
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 253 bits (620), Expect = 2e-66
Identities = 122/173 (70%), Positives = 138/173 (79%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 180
WKGYV ++AGGNDKQGFPMKQGVLTN+RVRLL+ KGHSCYRPRR GERKRKSVRGCIVD
Sbjct: 45 WKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQ 104
Query: 181 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPA 360
NLS LAL++V+KG ++IPGLTD V RRLGPKRAS IRKL+NL+KEDDVR+YVVKR LP
Sbjct: 105 NLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPE 164
Query: 361 KEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLL 519
K+GK KPR KAPKIQRL+TPVVLQ +EAEY K+L
Sbjct: 165 KDGK---KPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKIL 214
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 251 bits (614), Expect = 8e-66
Identities = 127/173 (73%), Positives = 139/173 (80%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 180
WKGYV+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDA
Sbjct: 45 WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDA 104
Query: 181 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPA 360
NLSVL LVIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L
Sbjct: 105 NLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-N 163
Query: 361 KEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLL 519
KEGK KPR KAPKIQRLVTP VLQ AEYAKLL
Sbjct: 164 KEGK---KPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLL 213
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 188 bits (457), Expect = 9e-47
Identities = 91/139 (65%), Positives = 106/139 (76%)
Frame = +1
Query: 7 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 186
GYV R+ GGNDKQGFPM QGVLTN+RVRLL KG CYRPR+ GE++RKSVRGCIV +L
Sbjct: 88 GYVFRITGGNDKQGFPMMQGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDL 147
Query: 187 SVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKE 366
S L L +V+KG EIPGLTD V ++LGPKRA+KIRKLFNL K DDVR+YV+ R +
Sbjct: 148 SALNLTLVKKGTNEIPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVIGRAI---- 203
Query: 367 GKENAKPRHKAPKIQRLVT 423
+N K R PKIQRLVT
Sbjct: 204 -SKNGKNRFIKPKIQRLVT 221
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 184 bits (447), Expect = 1e-45
Identities = 89/144 (61%), Positives = 110/144 (76%), Gaps = 3/144 (2%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 180
+KGYVL++ GGNDKQGFPM+QGVL RVR+LM KGH YRPR+DGE KRKS+RGCIV
Sbjct: 45 YKGYVLKITGGNDKQGFPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQ 104
Query: 181 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRV 351
++ VLAL +V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D V++ +++R
Sbjct: 105 DIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRT 164
Query: 352 LPAKEGKENAKPRHKAPKIQRLVT 423
K+GK+ R KAPKIQRLVT
Sbjct: 165 WTTKDGKK----RQKAPKIQRLVT 184
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 177 bits (432), Expect = 1e-43
Identities = 86/145 (59%), Positives = 108/145 (74%), Gaps = 3/145 (2%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 180
+KGYV ++AGGNDK GFPMKQGV+ RVRLL+S+GHSC+ RR G RKRKSVRGCIV
Sbjct: 45 FKGYVFKIAGGNDKDGFPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGP 104
Query: 181 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRV 351
++ VLAL IV+KG EI GLT +PR+LGPKRA+ I+KLF L KEDD +++ V++R
Sbjct: 105 DMRVLALQIVKKGVAEIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRT 164
Query: 352 LPAKEGKENAKPRHKAPKIQRLVTP 426
+GK+ R K PKIQRL+TP
Sbjct: 165 FKTAKGKD----RTKCPKIQRLITP 185
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 155 bits (376), Expect = 6e-37
Identities = 80/146 (54%), Positives = 107/146 (73%), Gaps = 2/146 (1%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRR--DGERKRKSVRGCIV 174
+KGY+ R+ GG+DK GFPM GVL +SRV LL+ +G + R GER+RK+VRGC++
Sbjct: 46 FKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVL 105
Query: 175 DANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVL 354
++++++ + I + G Q I G+TD PRRLGPKRASKIRKLFNLS+ +DVR+YVV+R +
Sbjct: 106 ASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRV 165
Query: 355 PAKEGKENAKPRHKAPKIQRLVTPVV 432
K GK K R KAPKIQRL+TP V
Sbjct: 166 -VKSGK---KDRLKAPKIQRLITPRV 187
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 153 bits (370), Expect = 3e-36
Identities = 76/142 (53%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 180
+KGY+ R+ GG DKQGFPMKQGV+T R+RLL+ G SCYRPR+DGERKRK+VRGCI+
Sbjct: 45 FKGYLFRIGGGFDKQGFPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISD 104
Query: 181 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLS-KEDDVRRYVVKRVLP 357
+S L V+++KG +EI GLT VPRR GPKRAS +R +F ++ + D + V+KR
Sbjct: 105 EISALHCVVLQKGEKEIDGLTTTAVPRRFGPKRASTLRAMFGITDSKFDASKLVLKR--E 162
Query: 358 AKEGKENAKPRHKAPKIQRLVT 423
K GK +PK+QRL+T
Sbjct: 163 VKPGK------FTSPKVQRLIT 178
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 146 bits (354), Expect = 3e-34
Identities = 64/116 (55%), Positives = 91/116 (78%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 180
+KGY+L++ GG DK GFPM GV TN+RVRLL+ + CY+P R+GER+RK+VRG IV
Sbjct: 44 FKGYILKITGGCDKDGFPMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAG 103
Query: 181 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 348
++SVL ++V+KG EI G+T+ +P R GP+RAS RKLFNLS++DDV+++V++R
Sbjct: 104 DISVLNTIVVKKGEGEIEGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 144 bits (348), Expect = 1e-33
Identities = 80/137 (58%), Positives = 94/137 (68%), Gaps = 2/137 (1%)
Frame = +1
Query: 19 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLA 198
R GGNDKQG VL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLA
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLA 115
Query: 199 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKE-GKE 375
L +V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D RV+ ++E G +
Sbjct: 116 LQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKAD--------RVISSEEHGPQ 167
Query: 376 N-AKPRHKAPKIQRLVT 423
K R KAPKIQRLVT
Sbjct: 168 RYGKKRQKAPKIQRLVT 184
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 137 bits (331), Expect = 2e-31
Identities = 73/146 (50%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 180
+ G R+ GGND QGFPM QGVL + R RLL+ +G CY RR+GERKRKS+RGCIV
Sbjct: 51 YAGCTFRITGGNDAQGFPMYQGVLKSQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGP 110
Query: 181 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNL--SKEDDVRRYVVKRV- 351
+L L++V+V G + +PGLTD VP+RL PKRASKIR+LF L +K D + +V +
Sbjct: 111 DLHALSVVLVDAGDKTLPGLTDVVVPKRLVPKRASKIRRLFGLPTTKVDPKDQMLVCELI 170
Query: 352 --LPAKEGKENAKPRHKAPKIQRLVT 423
L + +N + + K PK+QR+VT
Sbjct: 171 KELGHEVTLKNGEKKLKYPKVQRVVT 196
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 115 bits (276), Expect = 8e-25
Identities = 66/135 (48%), Positives = 84/135 (62%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 180
WKGY LR+AGGNDKQGFPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+A
Sbjct: 45 WKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEA 103
Query: 181 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPA 360
N+S L LV+++K P RLGP R+S I K++ L +EDD V+P
Sbjct: 104 NVSALTLVVLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD-------EVIPV 146
Query: 361 KEGKENAKPRHKAPK 405
K + + K R A K
Sbjct: 147 KLQRRHQKKRQNATK 161
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 105 bits (251), Expect = 8e-22
Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYR--PRRDGERKRKSVRGCIV 174
W + + GG DKQGFPMK+G+L+ SRV++L+ KG + R + GER RKSVRGCIV
Sbjct: 45 WDKSIFIITGGQDKQGFPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIV 104
Query: 175 DANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVL 354
+SVL + ++ ++ +T+ N + L KR+S +RK+ L+K DD+R++ +K
Sbjct: 105 SPEISVLNIKLLTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKHYIK--- 160
Query: 355 PAKEGKENAKPRHKAPKIQRLVTPVVLQ 438
AK+ K KIQRL+TP+ +Q
Sbjct: 161 IAKDFKNKV-------KIQRLITPIKIQ 181
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 104 bits (250), Expect = 1e-21
Identities = 56/140 (40%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDA 180
++G ++ + GG+D QGFPM G LT RVR L+SKG + YR RR G R+RKSVRG IV
Sbjct: 30 FEGTIMEITGGDDYQGFPMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSE 89
Query: 181 NLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPA 360
+ VL L+I+R G +EI GLT+ P++ K+RK+F + E+ ++ +L +
Sbjct: 90 EICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKS 149
Query: 361 K--EGKENAKPRHKAPKIQR 414
+ + K+ K RH +++R
Sbjct: 150 ECDDPKKIPKIRHNGKRMKR 169
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 63.3 bits (147), Expect = 3e-09
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Frame = +1
Query: 223 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-----VRRYVVKRVLP-AKEGKENAK 384
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + R + KR+ KE KE K
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAKE--K 137
Query: 385 PRHKAPKIQRL 417
+ + K QRL
Sbjct: 138 RQEQIAKRQRL 148
Score = 60.1 bits (139), Expect = 3e-08
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 1 WKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 99
WKGY++R++GGNDKQGFPMKQ VLT+ R+ LL+
Sbjct: 45 WKGYMVRISGGNDKQGFPMKQDVLTHDRIHLLL 77
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 62.5 bits (145), Expect = 6e-09
Identities = 43/108 (39%), Positives = 59/108 (54%)
Frame = +1
Query: 82 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 261
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 262 RLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 405
RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +1
Query: 4 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDAN 183
KGY LR+ GG+DK GFPMK+ V R + L++ G + ++P + G R+RK+VRG + +
Sbjct: 43 KGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVN-GGTGFKPTKKGLRRRKTVRGNTIADD 101
Query: 184 LSVLALVIVRKGAQEI 231
+S + + + +G Q +
Sbjct: 102 ISQINVKVSERGEQTL 117
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +1
Query: 10 YVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLS 189
Y L++ GG D+ GFPM+ + +R RLL+S G +RP+ G RKRK VRG ++ ++
Sbjct: 48 YELKITGGTDRDGFPMRPDLPGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDIL 106
Query: 190 VLALVIVRKG 219
+ V+V+ G
Sbjct: 107 QINTVVVKHG 116
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +1
Query: 16 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVL 195
L++ GG DK GFPM+ V RV++L+S+G +RPR GER++K+V G + N+ +
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQV 119
Query: 196 ALVIV 210
+ IV
Sbjct: 120 NMKIV 124
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 55.6 bits (128), Expect = 7e-07
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Frame = -3
Query: 339 DITTYIIFFAKVEQLTDFGSTFGT*TAGYISISQSRNFLGTLAHNNKSQDREIGVNNTST 160
D+ +IFF + E+LT+ T T + I ++R+ L N++ Q + ++ +T
Sbjct: 95 DVLADVIFFGQSEELTNLARTLRTTETRHFGIGEARDVGVALLDNDQVQHGNVLGDDATT 154
Query: 159 ----N*FTFSLSIAARSVT*VAL*HQKTNTAVCQDALFHRESLLVVAASDTKYIALP 1
+ FT + ++AA + AL H++ +T V Q AL H E+LLVV D + ++LP
Sbjct: 155 ARLASAFTLASAVAAEAAR--ALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLP 209
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 55.6 bits (128), Expect = 7e-07
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +1
Query: 16 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 165
L + GG DK GFPM+ + RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTVRG 109
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 53.2 bits (122), Expect = 3e-06
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Frame = +1
Query: 49 FPMKQGVLTNSRVRLLMSKGHS-CYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 225
F MKQ VL + RV LL++ HS Y+P R E S++ V +S+L +VI+ G +
Sbjct: 50 FSMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRK 108
Query: 226 EIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAK--EGKENAKPRHKA 399
+IPG T +R PKR +I+ F++S +K VL K + K++ KPR K
Sbjct: 109 DIPGQT-----KRWAPKRWRRIQS-FSVS---------LKTVLSTKKPQNKDSKKPRPKT 153
Query: 400 PKIQ 411
K+Q
Sbjct: 154 HKVQ 157
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 51.6 bits (118), Expect = 1e-05
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +1
Query: 7 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 186
GY L + GG+D GFPM + + R+L+S G + PR GER+RK+VRG + ++
Sbjct: 146 GYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKGERRRKTVRGNTITHDI 204
Query: 187 SVLALVIV 210
+ VIV
Sbjct: 205 VQINTVIV 212
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/66 (34%), Positives = 42/66 (63%)
Frame = +1
Query: 16 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVL 195
L++ GG+D GFPM+ V+ ++ ++L+S G + P +GER+RK++RG + + +
Sbjct: 150 LKITGGSDNSGFPMRFDVIGAAKRKILLS-GPPGFYPNENGERRRKTIRGNTISQEIVQI 208
Query: 196 ALVIVR 213
+IVR
Sbjct: 209 NTIIVR 214
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/78 (29%), Positives = 47/78 (60%)
Frame = +1
Query: 4 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDAN 183
+GY L++ GG+D+ GF M+ + ++R+L+ +G Y + G R+RKS+RG + +
Sbjct: 42 EGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEKGLRRRKSLRGNTISKD 100
Query: 184 LSVLALVIVRKGAQEIPG 237
++++ +V G+ + G
Sbjct: 101 ITLINTKVVEYGSAPLGG 118
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 50.4 bits (115), Expect = 2e-05
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +1
Query: 4 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDAN 183
KG L + GG+D+ GFPM+ + + R L+S G + PR GER+RK+VRG + +
Sbjct: 167 KGLQLEIRGGSDESGFPMRPDIPGPVKKRALLS-GPPGFWPREKGERRRKTVRGNTISED 225
Query: 184 LSVLALVIVRK 216
+ + IV++
Sbjct: 226 IVQINTKIVKQ 236
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 48.8 bits (111), Expect = 7e-05
Identities = 26/78 (33%), Positives = 44/78 (56%)
Frame = +1
Query: 7 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 186
GY + + GG+D G PM++ V + + +L+ +G + + P DGERKR +VRG V +
Sbjct: 47 GYTVEITGGSDDAGRPMREDVDGSDLMEVLL-EGGAGFNPDEDGERKRVTVRGKEVSEAV 105
Query: 187 SVLALVIVRKGAQEIPGL 240
+ L + I G + + L
Sbjct: 106 AQLNVAIDEHGEEPVAEL 123
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +1
Query: 7 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 174
G ++ GG D G PM GV + R ++L++ G + PR GER+RKSVRG ++
Sbjct: 155 GLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVRGRMI 209
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = +1
Query: 7 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 186
GY +++ GG D GF MK + R R+L + G Y P+ G+R+RK +RG + ++
Sbjct: 47 GYKVQITGGCDGSGFVMKPDLPGPRRQRILTATGVG-YVPKLPGQRRRKMMRGKEIAPDI 105
Query: 187 SVLALVIVRKGAQEIPGL 240
+ +V G++ I L
Sbjct: 106 VQVNAKVVEYGSKSIKAL 123
>UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyces
maris DSM 8797|Rep: Pseudouridine synthase -
Planctomyces maris DSM 8797
Length = 352
Score = 42.7 bits (96), Expect = 0.005
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Frame = +1
Query: 40 KQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 219
++G K+GV S ++ L +G S + E + + +R + V+ LV +R G
Sbjct: 171 RKGVRFKEGVFRVSGLKYLKKQGKSAFLELTLHEGQNREIRRMMARIGHKVIQLVRIRFG 230
Query: 220 AQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKP-RHK 396
+ L G RRL K+R+L N D+R ++GK+NA P + +
Sbjct: 231 PLNLGKLKTGE-SRRLSDTELKKLRQLLNEKHSPDIRH---------RKGKKNAAPAKTR 280
Query: 397 APK 405
AP+
Sbjct: 281 APR 283
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 42.7 bits (96), Expect = 0.005
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Frame = +1
Query: 22 VAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP--RRDGERKRKSVRGCIVDANLSVL 195
+ GG+DKQGF +K+ + T R+++ + KG R +R K+++VRG I+ + +S +
Sbjct: 51 INGGHDKQGFLLKKNLNTFERLKINVKKGSLGNRSHFKRKNLTKKRTVRGGILSSEISSI 110
Query: 196 ALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLF 303
LV + +E + ++L KR +K++ LF
Sbjct: 111 NLVKLPNNVKE--SSVFPSKEQKLA-KRVTKLKTLF 143
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 42.7 bits (96), Expect = 0.005
Identities = 24/75 (32%), Positives = 44/75 (58%)
Frame = +1
Query: 7 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 186
GY +++ GG+ GF M+ + T + ++L+ K S YR ++G RKR + RG I+ +++
Sbjct: 47 GYKMKITGGSSVDGFAMRPDLQTQGKKQILV-KYTSGYR-GKNGIRKRITARGSIIGSDI 104
Query: 187 SVLALVIVRKGAQEI 231
+ + L I + G I
Sbjct: 105 TQINLKITQYGPTPI 119
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 41.9 bits (94), Expect = 0.009
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +1
Query: 7 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 162
GY + + GG+D+ G P ++ + R +LL+++G + P +GERKRK +R
Sbjct: 47 GYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVG-FHPVMEGERKRKMIR 97
>UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S6e -
Pyrobaculum aerophilum
Length = 148
Score = 39.9 bits (89), Expect = 0.035
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG-CIVDA 180
KG +R+ GG+ +G PM GV + + +++ G Y P + G +K+K VRG I D+
Sbjct: 51 KGAKIRITGGSGIEGAPMHPGVPGPVK-KYILADGPPGYWPPKKGMKKKKLVRGNTISDS 109
Query: 181 NLSVLALVIVRKGAQEIPGLTDG 249
+ + A+++ K P + G
Sbjct: 110 IVQINAVIVYPKDYTGPPAIPLG 132
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 38.7 bits (86), Expect = 0.080
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 16 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 165
+R+ GG+DK G PM+ V +R +L+S+G R G R RK VRG
Sbjct: 54 IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVG-LRDAERGGRTRKLVRG 102
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 37.9 bits (84), Expect = 0.14
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 16 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 186
L++ GG+DK G PM+ + +R +L+SKG + G+R RK +RG V +
Sbjct: 48 LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVG-LQDAEKGQRVRKLMRGNTVSEEI 103
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 35.1 bits (77), Expect = 0.98
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 6 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKG 107
G C RWR ++ + DE G + PC+ DV+G
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRG 50
>UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcina
acetivorans|Rep: Glycosyltransferase - Methanosarcina
acetivorans
Length = 812
Score = 34.3 bits (75), Expect = 1.7
Identities = 19/101 (18%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +1
Query: 52 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV-DANLSVLALVIVRKGAQE 228
P K+ ++T++R ++L+ +SCY PR G+ + ++ + + ++++ +++ K Q
Sbjct: 405 PAKKNIITSNREKILVLATYSCYPPRGGGQHRLYNIYSLLAKEFDVTICSIIEANKQYQN 464
Query: 229 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRV 351
+ + D + + P+ R + K+ Y V +
Sbjct: 465 L--VLDNGLKQICIPQSTEHARYQWEAEKKVGANLYDVAMI 503
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 3.0
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 199 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 339
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0676800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 822
Score = 32.7 bits (71), Expect = 5.2
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 148 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKE 318
+KS + C N ++ LV++RKG + LT G + K S RK+ N+SK+
Sbjct: 227 KKSSQSCSGRLNSYIVVLVMLRKGGWKSQQLTIGLARHEVAVKIRSLNRKIENISKD 283
>UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1146
Score = 32.7 bits (71), Expect = 5.2
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 244 DGNVPRRLGPKRASKIRK-LFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQR 414
D + + PK+ S +K + + S EDD K++L + + E KPR K+P+ +R
Sbjct: 1012 DSSDEEEIKPKQKSPQKKPILSSSSEDDAIPPPKKKLLDSSDDDEEIKPRQKSPQKKR 1069
>UniRef50_A1TZN4 Cluster: Flagellar hook-associated protein FlgK;
n=2; Marinobacter|Rep: Flagellar hook-associated protein
FlgK - Marinobacter aquaeolei (strain ATCC 700491 / DSM
11845 / VT8)(Marinobacter hydrocarbonoclasticus (strain
DSM 11845))
Length = 688
Score = 32.3 bits (70), Expect = 6.9
Identities = 24/91 (26%), Positives = 42/91 (46%)
Frame = +1
Query: 37 DKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 216
D P +Q VL+ ++ + +G + ++ K + +G + DAN + ++ +
Sbjct: 123 DPTSLPQRQLVLSEAQQLVNRFQGLNQEFIQQRESVKTQMQQG-VKDANTLLKSIAELNL 181
Query: 217 GAQEIPGLTDGNVPRRLGPKRASKIRKLFNL 309
E PGL G P L KR K+R+L L
Sbjct: 182 AISESPGLAQGREPLELMDKRDEKLRQLSEL 212
>UniRef50_Q3A5C8 Cluster: Putative uncharacterized protein; n=1;
Pelobacter carbinolicus DSM 2380|Rep: Putative
uncharacterized protein - Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1)
Length = 980
Score = 31.9 bits (69), Expect = 9.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 304 NLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLV 420
N +DD+R V +++LPA E PR +I+RLV
Sbjct: 441 NRQVQDDLRFLVTEKILPALPSAERMNPRAALDEIRRLV 479
>UniRef50_A6UN38 Cluster: Response regulator receiver protein; n=1;
Sinorhizobium medicae WSM419|Rep: Response regulator
receiver protein - Sinorhizobium medicae WSM419
Length = 406
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Frame = +1
Query: 238 LTDGNVPRRLG---PKRASKIRKLFNLSKEDDVRR--YVV 342
L D N+PRRLG P+R + L +L +E D+RR Y+V
Sbjct: 52 LLDVNIPRRLGDRKPQRGGGLELLKDLGRESDLRRPTYIV 91
>UniRef50_A0N0V6 Cluster: Putative regulatory protein; n=2; Azoarcus
anaerobius|Rep: Putative regulatory protein - Azoarcus
anaerobius
Length = 661
Score = 31.9 bits (69), Expect = 9.2
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 94 LMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGP 273
++ GH YR R +R+ D ++ + L ++R +E G D V R+LG
Sbjct: 582 IIKPGHLAYRMRDRRTPERQHAAASSRDQSIPAIQLDLIRSAIEEFNGNVD-LVGRKLGL 640
Query: 274 KRASKIRKL 300
RA+ R++
Sbjct: 641 SRATVYRRM 649
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,621,594
Number of Sequences: 1657284
Number of extensions: 10143267
Number of successful extensions: 30285
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 29369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30245
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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