Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306D08f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14947| Best HMM Match : TSP_1 (HMM E-Value=6.8e-21) 70 1e-12
SB_12391| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_50139| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 5e-12
SB_12390| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 9e-12
SB_49419| Best HMM Match : SCP (HMM E-Value=5e-14) 63 1e-10
SB_31645| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_2571| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_41449| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_54415| Best HMM Match : TSP_1 (HMM E-Value=6.8e-21) 42 3e-04
SB_15767| Best HMM Match : DUF54 (HMM E-Value=7.6) 40 0.002
SB_5403| Best HMM Match : TSP_1 (HMM E-Value=0) 40 0.002
SB_8388| Best HMM Match : ig (HMM E-Value=8.80001e-41) 38 0.005
SB_42214| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_54765| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.3
SB_29191| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_43865| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_56073| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8) 27 7.1
SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_2866| Best HMM Match : RasGEF (HMM E-Value=1.3e-26) 27 7.1
SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_29936| Best HMM Match : P-II (HMM E-Value=3.9) 27 9.4
SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_56837| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_14947| Best HMM Match : TSP_1 (HMM E-Value=6.8e-21)
Length = 666
Score = 69.7 bits (163), Expect = 1e-12
Identities = 47/113 (41%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Frame = +3
Query: 60 SFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFNDPDVG--TALITRTA 233
S IDTT SM DEIN KA I + + + K V+ YIL P+NDP G +
Sbjct: 255 SLIFTIDTTGSMRDEINAAKA-IVKAIAGYDRKGKVN-YILSPYNDPGSGPVSKFDHSKR 312
Query: 234 DDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPE--STIYVFTDAYPKNYG 386
F + L GG DC E + GI A+R PE S +YVFTDA PK G
Sbjct: 313 SQFESQINALRAYGGGDCNELTFNGIVDAIRTGQPEVGSPMYVFTDAPPKAKG 365
>SB_12391| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 68.5 bits (160), Expect = 3e-12
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +3
Query: 75 IDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFNDPDVGTALITRTADDFICSL 254
IDTT SM +EIN K + + R ++ Y L PFNDP G F+ +L
Sbjct: 193 IDTTGSMSEEINAAKRIVESIARY--DRERPVRYTLSPFNDPHTGPVRRYGDRSQFLRAL 250
Query: 255 TTLTTSGGKDCPENSLAGIEHALRVSDP--ESTIYVFTDAYPKN 380
L +GG DC E + GI +A+ + P ES ++VFTDA PK+
Sbjct: 251 DNLRATGGGDCKEMTFHGIYNAINETKPPIESPMFVFTDAGPKD 294
>SB_50139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 67.7 bits (158), Expect = 5e-12
Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Frame = +3
Query: 60 SFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFNDPDVG--TALITRTA 233
S IDTT SM DEIN KA I + + + K V YIL P++DP G +
Sbjct: 608 SLIFTIDTTGSMKDEINAAKA-IVKAIAGYDRKGKVD-YILSPYSDPGSGPVSKFDHSKR 665
Query: 234 DDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPE--STIYVFTDAYPKNYG 386
F + L GG DC E + GI A+R PE S +YVFTDA PK G
Sbjct: 666 SQFESQINALRAYGGGDCNELTFNGIVDAIRTGQPEVGSPMYVFTDAPPKAKG 718
>SB_12390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 868
Score = 66.9 bits (156), Expect = 9e-12
Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +3
Query: 75 IDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFNDPDVGTALITRTADDFICSL 254
IDTT SM +EIN K I + R K Y L PFNDP G F+ +L
Sbjct: 322 IDTTGSMREEINAAKRIIESIARYDREKPV--RYTLSPFNDPHTGPVRTYSDRSQFLRAL 379
Query: 255 TTLTTSGGKDCPENSLAGIEHALRVSDP--ESTIYVFTDAYPKN 380
L +GG DC E + GI +A+ + P S ++VFTDA PK+
Sbjct: 380 DNLRATGGGDCKEMTFHGIYNAIVETKPPEHSPMFVFTDAGPKD 423
>SB_49419| Best HMM Match : SCP (HMM E-Value=5e-14)
Length = 555
Score = 63.3 bits (147), Expect = 1e-10
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Frame = +3
Query: 27 FIIMIAEITCKSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFNDPDV 206
F +++ S + +DTT SM E + + + L +T +IL PFNDP
Sbjct: 72 FAVLMGGRGSNSISFALDTTGSMRQEKMAMMTIVAGLSALLPGGTT--KFILSPFNDPAY 129
Query: 207 GTALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHAL--RVSDPESTIYVFTDAYPKN 380
G + TA ++ L +GG DCPE + GI AL S++YV TDA K+
Sbjct: 130 GPVTVYSTAAGLNAAVNALAITGGGDCPEKTFHGIVGALINPYIVTGSSLYVITDAPSKD 189
Query: 381 YGNMPSVLDLCTNKYSQVHIILTGVCYMSARNS 479
Y N P + +L K+ ++ ++ +SA S
Sbjct: 190 Y-NGPPIYNLLIAKFLAQYLDISVTFLISASGS 221
>SB_31645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 718
Score = 62.5 bits (145), Expect = 2e-10
Identities = 44/113 (38%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Frame = +3
Query: 60 SFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFNDPDVG--TALITRTA 233
S V+DTT SM EI K I + +S YIL P+NDPD G T
Sbjct: 219 SLIFVVDTTGSMTAEITAAKNTIRALTGY--KRSEAVDYILSPYNDPDSGPVTTYNQSHI 276
Query: 234 DDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPE--STIYVFTDAYPKNYG 386
++F +++ L GG DCPE + GI +A+R P+ S I+VFTDA K G
Sbjct: 277 NEFKKAVSHLYAYGGYDCPELTFNGIINAIRQGKPKQGSPIFVFTDAPAKPDG 329
>SB_2571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 59.7 bits (138), Expect = 1e-09
Identities = 42/111 (37%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = +3
Query: 60 SFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFNDPDVGTALITRTADD 239
S +DTT SM EI K +I + K V +IL FNDP G + D
Sbjct: 273 SLIFTLDTTGSMRKEIVAAK-DIIRAIAGYERKGKVD-FILSLFNDPGSGYIQKSDKIAD 330
Query: 240 FICSLTTLTTSGGKDCPENSLAGIEHALRVSDPE--STIYVFTDAYPKNYG 386
F + + T GG DCPE + GI A+ +P S +YVFTDA PK G
Sbjct: 331 FESEINAVRTLGGGDCPELAFNGIVDAIWKGNPRIMSPMYVFTDAPPKARG 381
>SB_41449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 57.6 bits (133), Expect = 6e-09
Identities = 52/153 (33%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Frame = +3
Query: 75 IDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFNDPDVGTALITRTADDFICSL 254
IDTT SM EI K +V+ N + V+ YIL PF+DP F+ +
Sbjct: 317 IDTTGSMSAEIETAKKIAVDVI-NYPRNNPVN-YILSPFSDPGA----------KFVDDI 364
Query: 255 TTLTTSGGKDCPENSLAGIEHALRVS-DPESTIYVFTDAYPKNY--GNMPSVLDLCTNKY 425
L GG DC E + GI AL D S +YVFTDA PK+ N+ SV +
Sbjct: 365 NKLRAKGGGDCAELAFKGILDALMEGPDWGSPMYVFTDAPPKDATPDNIQSVKAMAEYLG 424
Query: 426 SQVHIILTGVCYMSARN--SAGRLDLYYEVARA 518
++ TG+C + N S D + E+A A
Sbjct: 425 VTINFFTTGMCNQAGSNAISLPSPDRFKEIAEA 457
>SB_54415| Best HMM Match : TSP_1 (HMM E-Value=6.8e-21)
Length = 612
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +3
Query: 60 SFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFNDPD 203
S IDTT SM DEIN KA I + + + K V+ YIL P+NDPD
Sbjct: 270 SLIFTIDTTGSMRDEINAAKA-IVKAIAGYDRKGKVN-YILSPYNDPD 315
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 240 FICSLTTLTTSGGKDCPENSLAGIEHALRVSDPE--STIYVFTDAYPKNYG 386
F + L GG DC E + GI A+R PE S +YVFTDA PK G
Sbjct: 359 FESQINALRAYGGGDCNELTFNGIVDAIRTGQPEVGSPMYVFTDAPPKAKG 409
>SB_15767| Best HMM Match : DUF54 (HMM E-Value=7.6)
Length = 168
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3
Query: 60 SFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFNDP 200
S IDTT SM DEIN KA I + + + K V+ YIL P+NDP
Sbjct: 123 SLIFTIDTTGSMRDEINAAKA-IVKAIAGYDRKGKVN-YILSPYNDP 167
>SB_5403| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 684
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3
Query: 60 SFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFNDP 200
S IDTT SM DEIN KA I + + + K V+ YIL P+NDP
Sbjct: 639 SLIFTIDTTGSMRDEINAAKA-IVKAIAGYDRKGKVN-YILSPYNDP 683
>SB_8388| Best HMM Match : ig (HMM E-Value=8.80001e-41)
Length = 666
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +3
Query: 297 SLAGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKYSQ 431
SL+ I AL +S P S +YVFTDA K+ G VL L K SQ
Sbjct: 2 SLSAILLALELSLPGSYVYVFTDAQAKDLGLTEKVLKLVQQKQSQ 46
>SB_42214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 34.3 bits (75), Expect = 0.062
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +3
Query: 72 VIDTTESMDDEINIIKANIGEVV-RNLNNK-STVSAYILVPFNDPDVGTALITRT-ADDF 242
V DTT SM D++ ++A +++ RNL + Y LVPF+DP + T +
Sbjct: 47 VFDTTGSMYDDLVQVRAGARQILARNLERPVKPLYNYALVPFHDPGPEMIPVPETISGPE 106
Query: 243 ICSLTTLTTSGGKDCPENS 299
+ TT T G ++ P+ S
Sbjct: 107 MIPKTTPTDPGTRNDPQES 125
>SB_54765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 30.3 bits (65), Expect = 1.0
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
Frame = +3
Query: 72 VIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFND-PDVGTALITRTAD---- 236
++D T SM + I + ++ + ++ + LV + D P + +TR D
Sbjct: 21 IVDCTGSMGEYIRQAQKHVISISETISRTAYNVRLALVEYRDHPPQDKSFVTRVHDFTSD 80
Query: 237 --DFICSLTTLTTSGGKDCPENSLAGIEHALRV---SDPESTIYVFTDAYPKNYG 386
+ + ++ SGG DCPE+ I A ++ D + DA P G
Sbjct: 81 VKEMKVWVDKMSASGGGDCPESVADAIFKACKLGYREDATKMCVLIADAPPHGLG 135
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 60 SFTVVIDTTESMDDEINIIKANIGEVVRNLNNKS-TVSAYILVPFNDP 200
S T V+DTT SM E K + +V ++ K+ + + YIL PFNDP
Sbjct: 183 SLTFVLDTTGSMVPE----KDAMISIVSQISAKAPSGTKYILSPFNDP 226
>SB_29191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 141 RNLNNKSTVSAYILVPFNDPDVGTALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHA 320
+ +N+K+ A I+VP N DVG +T T + L T+T S K + + ++
Sbjct: 298 KKVNSKTLHKAGIVVPVNAMDVGYRPLTVTDAELKKMLKTITESENKSAKDKASDELQEL 357
Query: 321 L 323
L
Sbjct: 358 L 358
>SB_43865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = +3
Query: 72 VIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFND-PDVGTALITRTAD---- 236
++D T SM + I + ++ + ++ + LV + D P + +TR D
Sbjct: 21 IVDCTGSMGEYIRQAQKHVISISETISRTAYNVRLALVEYRDHPPQDKSFVTRVHDFTSD 80
Query: 237 --DFICSLTTLTTSGGKDCPENSLAGIEHALRV 329
+ + ++ SGG DCPE+ I A ++
Sbjct: 81 VKEMKVWVDKMSASGGGDCPESVADAIFKACKL 113
>SB_56073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 384 GNMPSVLDLCTNKYSQVHIILTGVCYMSARNSAGRLDLYYEVARA 518
GN P L CTNK V ++L ++A + GR L EVAR+
Sbjct: 49 GNTPLHLAACTNKVQIVTLLLKAGSDLNAVDYTGRTPL--EVARS 91
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 321 RHARFRPKSSLDSLYHRSW 265
RHA P+S+LD +YH W
Sbjct: 49 RHAPQAPRSALDGVYHPFW 67
>SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8)
Length = 411
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 321 RHARFRPKSSLDSLYHRSW 265
RHA P+S+LD +YH W
Sbjct: 335 RHAPQAPRSALDGVYHPFW 353
>SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 210 TALITRTADDFICSLTTLTTS-GGKDCPENSLAGIEHALRVSDPEST 347
TAL +RT D S LTT G P +S+A + H L + ST
Sbjct: 635 TALASRTTDSLADSFLKLTTKLVGMALPIDSVADLPHDLSPTTSSST 681
>SB_2866| Best HMM Match : RasGEF (HMM E-Value=1.3e-26)
Length = 566
Score = 27.5 bits (58), Expect = 7.1
Identities = 8/37 (21%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 351 YVFTDAYPKNYGNMPSVLDLCTNKYSQVHI-ILTGVC 458
+++ + +G + + LD+C +++++VH ++T +C
Sbjct: 284 FIYQSFDREKFGQISANLDICLSRFNEVHYWVITEIC 320
>SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 321 RHARFRPKSSLDSLYHRSW 265
RHA P+S+LD YH W
Sbjct: 49 RHAPQAPRSALDGFYHPFW 67
>SB_29936| Best HMM Match : P-II (HMM E-Value=3.9)
Length = 147
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 210 TALITRTADDFICSLTTLTTS-GGKDCPENSLAGIEHALRVSD 335
TAL +RT D S TLTT G P +S+ G+ + L VSD
Sbjct: 87 TALASRTTDALADSFLTLTTKLVGMALPIDSVVGLHNDL-VSD 128
>SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 3 KYFNILLLFIIMIAEITC 56
K+FN ++FI+MI ++TC
Sbjct: 886 KWFNYGIIFIVMILDLTC 903
>SB_56837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -2
Query: 319 ACSIP-AKEFSGQSLPPLVVNVVKE 248
ACSIP ++SG++ PP ++ V KE
Sbjct: 386 ACSIPDCVKYSGENFPPQLLRVRKE 410
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,590,246
Number of Sequences: 59808
Number of extensions: 366235
Number of successful extensions: 923
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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