Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306D08f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL360004-4|CAI16954.2| 746|Homo sapiens novel protein similar t... 93 4e-19
BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA seq... 91 2e-18
AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA seq... 91 2e-18
AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA seq... 91 2e-18
AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA seq... 91 2e-18
AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA seq... 91 2e-18
AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA seq... 91 2e-18
AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA seq... 91 2e-18
AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA seq... 91 2e-18
AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein. 91 2e-18
BX248133-9|CAM26111.1| 891|Homo sapiens chromosome 6 open readi... 74 3e-13
BA000025-13|BAB63304.1| 852|Homo sapiens G7C protein. 74 3e-13
AL662899-45|CAI18431.2| 891|Homo sapiens chromosome 6 open read... 74 3e-13
AL662834-10|CAI17731.2| 891|Homo sapiens chromosome 6 open read... 74 3e-13
AJ245418-1|CAB52192.1| 536|Homo sapiens G7c protein protein. 74 3e-13
AF134726-11|AAD21820.1| 852|Homo sapiens NG37 protein. 74 3e-13
D87448-1|BAA13389.1| 1550|Homo sapiens KIAA0259 protein. 29 9.9
D21205-1|BAA04747.1| 630|Homo sapiens estrogen responsive finge... 29 9.9
BC151237-1|AAI51238.1| 1435|Homo sapiens topoisomerase (DNA) II ... 29 9.9
BC126209-1|AAI26210.2| 1435|Homo sapiens topoisomerase (DNA) II ... 29 9.9
BC042541-1|AAH42541.1| 630|Homo sapiens tripartite motif-contai... 29 9.9
BC016924-1|AAH16924.1| 630|Homo sapiens tripartite motif-contai... 29 9.9
AB208994-1|BAD92231.1| 644|Homo sapiens tripartite motif-contai... 29 9.9
AB019397-1|BAA34202.1| 1435|Homo sapiens DNA topoisomerase II bi... 29 9.9
>AL360004-4|CAI16954.2| 746|Homo sapiens novel protein similar to
hemicentin (LOC392395) protein.
Length = 746
Score = 93.5 bits (222), Expect = 4e-19
Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Frame = +3
Query: 72 VIDTTESMDDEINIIKANIGEVV-RNLNNKS-TVSAYILVPFNDPDVGTALITRTADDFI 245
V D T SM DE+ + ++ R+L+ +S ++ Y LVPF+DPD+G +T F
Sbjct: 5 VFDVTGSMWDELMQVIDGASRILERSLSRRSQAIANYALVPFHDPDIGPVTLTADPTVFQ 64
Query: 246 CSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKY 425
L L GG DCPE S+ I+ A+ V++P S IYVF+DA K+Y +L L K
Sbjct: 65 RELRELYVQGGGDCPEMSVGAIKAAVEVANPGSFIYVFSDARAKDYHKKEELLRLLQLKQ 124
Query: 426 SQVHIILTGVCYMSARNSAGRLDLYYEVA 512
SQV +LTG C R G L Y E+A
Sbjct: 125 SQVVFVLTGDC--GDRTHPGYL-AYEEIA 150
>BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA
sequence from clone RP11-465I11 on chromosome 1 Contains
part of the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 91.1 bits (216), Expect = 2e-18
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +3
Query: 72 VIDTTESM-DDEINIIKANIGEVVRNLNN-KSTVSAYILVPFNDPDVGTALITRTADDFI 245
V D T SM DD + +I+ + +L K + + LVPF+DP++G IT F
Sbjct: 45 VFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLFNFALVPFHDPEIGPVTITTDPKKFQ 104
Query: 246 CSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKY 425
L L GG DCPE S+ I+ AL +S P S IYVFTDA K+Y VL L K
Sbjct: 105 YELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQ 164
Query: 426 SQVHIILTGVC 458
SQV +LTG C
Sbjct: 165 SQVVFVLTGDC 175
>AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA
sequence from clone GS1-268N14 on chromosome 1 Contains
part of the gene for hemicentin. ).
Length = 5635
Score = 91.1 bits (216), Expect = 2e-18
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +3
Query: 72 VIDTTESM-DDEINIIKANIGEVVRNLNN-KSTVSAYILVPFNDPDVGTALITRTADDFI 245
V D T SM DD + +I+ + +L K + + LVPF+DP++G IT F
Sbjct: 45 VFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLFNFALVPFHDPEIGPVTITTDPKKFQ 104
Query: 246 CSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKY 425
L L GG DCPE S+ I+ AL +S P S IYVFTDA K+Y VL L K
Sbjct: 105 YELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQ 164
Query: 426 SQVHIILTGVC 458
SQV +LTG C
Sbjct: 165 SQVVFVLTGDC 175
>AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA
sequence from clone GS1-77J13 on chromosome 1 Contains
part of the gene for hemicentin. ).
Length = 5635
Score = 91.1 bits (216), Expect = 2e-18
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +3
Query: 72 VIDTTESM-DDEINIIKANIGEVVRNLNN-KSTVSAYILVPFNDPDVGTALITRTADDFI 245
V D T SM DD + +I+ + +L K + + LVPF+DP++G IT F
Sbjct: 45 VFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLFNFALVPFHDPEIGPVTITTDPKKFQ 104
Query: 246 CSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKY 425
L L GG DCPE S+ I+ AL +S P S IYVFTDA K+Y VL L K
Sbjct: 105 YELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQ 164
Query: 426 SQVHIILTGVC 458
SQV +LTG C
Sbjct: 165 SQVVFVLTGDC 175
>AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA
sequence from clone GS1-164L12 on chromosome 1 Contains
part of the gene for hemicentin. ).
Length = 5635
Score = 91.1 bits (216), Expect = 2e-18
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +3
Query: 72 VIDTTESM-DDEINIIKANIGEVVRNLNN-KSTVSAYILVPFNDPDVGTALITRTADDFI 245
V D T SM DD + +I+ + +L K + + LVPF+DP++G IT F
Sbjct: 45 VFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLFNFALVPFHDPEIGPVTITTDPKKFQ 104
Query: 246 CSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKY 425
L L GG DCPE S+ I+ AL +S P S IYVFTDA K+Y VL L K
Sbjct: 105 YELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQ 164
Query: 426 SQVHIILTGVC 458
SQV +LTG C
Sbjct: 165 SQVVFVLTGDC 175
>AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA
sequence from clone GS1-174L6 on chromosome 1 Contains
the3' end of the gene for hemicentin, the PRG4 gene for
proteoglycan 4 ).
Length = 5635
Score = 91.1 bits (216), Expect = 2e-18
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +3
Query: 72 VIDTTESM-DDEINIIKANIGEVVRNLNN-KSTVSAYILVPFNDPDVGTALITRTADDFI 245
V D T SM DD + +I+ + +L K + + LVPF+DP++G IT F
Sbjct: 45 VFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLFNFALVPFHDPEIGPVTITTDPKKFQ 104
Query: 246 CSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKY 425
L L GG DCPE S+ I+ AL +S P S IYVFTDA K+Y VL L K
Sbjct: 105 YELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQ 164
Query: 426 SQVHIILTGVC 458
SQV +LTG C
Sbjct: 165 SQVVFVLTGDC 175
>AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA
sequence from clone GS1-153O3 on chromosome 1 Contains
part of the gene for hemicentin. ).
Length = 5635
Score = 91.1 bits (216), Expect = 2e-18
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +3
Query: 72 VIDTTESM-DDEINIIKANIGEVVRNLNN-KSTVSAYILVPFNDPDVGTALITRTADDFI 245
V D T SM DD + +I+ + +L K + + LVPF+DP++G IT F
Sbjct: 45 VFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLFNFALVPFHDPEIGPVTITTDPKKFQ 104
Query: 246 CSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKY 425
L L GG DCPE S+ I+ AL +S P S IYVFTDA K+Y VL L K
Sbjct: 105 YELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQ 164
Query: 426 SQVHIILTGVC 458
SQV +LTG C
Sbjct: 165 SQVVFVLTGDC 175
>AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA
sequence from clone GS1-118G19 on chromosome 1q25.1-31.1
Contains the 5' end of the gene for hemicentin. ).
Length = 5635
Score = 91.1 bits (216), Expect = 2e-18
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +3
Query: 72 VIDTTESM-DDEINIIKANIGEVVRNLNN-KSTVSAYILVPFNDPDVGTALITRTADDFI 245
V D T SM DD + +I+ + +L K + + LVPF+DP++G IT F
Sbjct: 45 VFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLFNFALVPFHDPEIGPVTITTDPKKFQ 104
Query: 246 CSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKY 425
L L GG DCPE S+ I+ AL +S P S IYVFTDA K+Y VL L K
Sbjct: 105 YELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQ 164
Query: 426 SQVHIILTGVC 458
SQV +LTG C
Sbjct: 165 SQVVFVLTGDC 175
>AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA
sequence from clone GS1-248A21 on chromosome 1q31.1-31.3
Contains part of the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 91.1 bits (216), Expect = 2e-18
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +3
Query: 72 VIDTTESM-DDEINIIKANIGEVVRNLNN-KSTVSAYILVPFNDPDVGTALITRTADDFI 245
V D T SM DD + +I+ + +L K + + LVPF+DP++G IT F
Sbjct: 45 VFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLFNFALVPFHDPEIGPVTITTDPKKFQ 104
Query: 246 CSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKY 425
L L GG DCPE S+ I+ AL +S P S IYVFTDA K+Y VL L K
Sbjct: 105 YELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQ 164
Query: 426 SQVHIILTGVC 458
SQV +LTG C
Sbjct: 165 SQVVFVLTGDC 175
>AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein.
Length = 5636
Score = 91.1 bits (216), Expect = 2e-18
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +3
Query: 72 VIDTTESM-DDEINIIKANIGEVVRNLNN-KSTVSAYILVPFNDPDVGTALITRTADDFI 245
V D T SM DD + +I+ + +L K + + LVPF+DP++G IT F
Sbjct: 45 VFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLFNFALVPFHDPEIGPVTITTDPKKFQ 104
Query: 246 CSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKY 425
L L GG DCPE S+ I+ AL +S P S IYVFTDA K+Y VL L K
Sbjct: 105 YELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQ 164
Query: 426 SQVHIILTGVC 458
SQV +LTG C
Sbjct: 165 SQVVFVLTGDC 175
>BX248133-9|CAM26111.1| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 74.1 bits (174), Expect = 3e-13
Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 39 IAEIT-CKSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSA-YILVPFNDPDVGT 212
+ +IT S + V+DTT SM +EIN K +V Y+LVPF+DP G
Sbjct: 307 LLDITPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPVHYVLVPFHDPGFGP 366
Query: 213 ALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNM 392
T D F L + GG D PE L+ ++ AL + P S I+VFTDA PK+
Sbjct: 367 VFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLT 426
Query: 393 PSVLDLCTNKYSQVHIILT 449
V L + +V ++T
Sbjct: 427 NQVESLTQERRCRVTFLVT 445
>BA000025-13|BAB63304.1| 852|Homo sapiens G7C protein.
Length = 852
Score = 74.1 bits (174), Expect = 3e-13
Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 39 IAEIT-CKSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSA-YILVPFNDPDVGT 212
+ +IT S + V+DTT SM +EIN K +V Y+LVPF+DP G
Sbjct: 307 LLDITPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPVHYVLVPFHDPGFGP 366
Query: 213 ALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNM 392
T D F L + GG D PE L+ ++ AL + P S I+VFTDA PK+
Sbjct: 367 VFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLT 426
Query: 393 PSVLDLCTNKYSQVHIILT 449
V L + +V ++T
Sbjct: 427 NQVESLTQERRCRVTFLVT 445
>AL662899-45|CAI18431.2| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 74.1 bits (174), Expect = 3e-13
Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 39 IAEIT-CKSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSA-YILVPFNDPDVGT 212
+ +IT S + V+DTT SM +EIN K +V Y+LVPF+DP G
Sbjct: 307 LLDITPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPVHYVLVPFHDPGFGP 366
Query: 213 ALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNM 392
T D F L + GG D PE L+ ++ AL + P S I+VFTDA PK+
Sbjct: 367 VFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLT 426
Query: 393 PSVLDLCTNKYSQVHIILT 449
V L + +V ++T
Sbjct: 427 NQVESLTQERRCRVTFLVT 445
>AL662834-10|CAI17731.2| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 74.1 bits (174), Expect = 3e-13
Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 39 IAEIT-CKSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSA-YILVPFNDPDVGT 212
+ +IT S + V+DTT SM +EIN K +V Y+LVPF+DP G
Sbjct: 307 LLDITPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPVHYVLVPFHDPGFGP 366
Query: 213 ALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNM 392
T D F L + GG D PE L+ ++ AL + P S I+VFTDA PK+
Sbjct: 367 VFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLT 426
Query: 393 PSVLDLCTNKYSQVHIILT 449
V L + +V ++T
Sbjct: 427 NQVESLTQERRCRVTFLVT 445
>AJ245418-1|CAB52192.1| 536|Homo sapiens G7c protein protein.
Length = 536
Score = 74.1 bits (174), Expect = 3e-13
Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 39 IAEIT-CKSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSA-YILVPFNDPDVGT 212
+ +IT S + V+DTT SM +EIN K +V Y+LVPF+DP G
Sbjct: 9 LLDITPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPVHYVLVPFHDPGFGP 68
Query: 213 ALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNM 392
T D F L + GG D PE L+ ++ AL + P S I+VFTDA PK+
Sbjct: 69 VFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLT 128
Query: 393 PSVLDLCTNKYSQVHIILT 449
V L + +V ++T
Sbjct: 129 NQVESLTQERRCRVTFLVT 147
>AF134726-11|AAD21820.1| 852|Homo sapiens NG37 protein.
Length = 852
Score = 74.1 bits (174), Expect = 3e-13
Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 39 IAEIT-CKSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSA-YILVPFNDPDVGT 212
+ +IT S + V+DTT SM +EIN K +V Y+LVPF+DP G
Sbjct: 307 LLDITPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPVHYVLVPFHDPGFGP 366
Query: 213 ALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNM 392
T D F L + GG D PE L+ ++ AL + P S I+VFTDA PK+
Sbjct: 367 VFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLT 426
Query: 393 PSVLDLCTNKYSQVHIILT 449
V L + +V ++T
Sbjct: 427 NQVESLTQERRCRVTFLVT 445
>D87448-1|BAA13389.1| 1550|Homo sapiens KIAA0259 protein.
Length = 1550
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 57 KSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVP 188
KSF V+ + E+ + NIIK N G+++ L+ TV+ Y +VP
Sbjct: 584 KSFLVLGFSNENESNIANIIKENAGKIMSLLSR--TVADYAVVP 625
>D21205-1|BAA04747.1| 630|Homo sapiens estrogen responsive finger
protein protein.
Length = 630
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 242 EVIGSSCYQCGTHIWIIERHKN 177
+V+G CY+ G H W +E KN
Sbjct: 500 QVLGLHCYKKGIHYWEVELQKN 521
>BC151237-1|AAI51238.1| 1435|Homo sapiens topoisomerase (DNA) II
binding protein 1 protein.
Length = 1435
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 57 KSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVP 188
KSF V+ + E+ + NIIK N G+++ L+ TV+ Y +VP
Sbjct: 469 KSFLVLGFSNENESNIANIIKENAGKIMSLLSR--TVADYAVVP 510
>BC126209-1|AAI26210.2| 1435|Homo sapiens topoisomerase (DNA) II
binding protein 1 protein.
Length = 1435
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 57 KSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVP 188
KSF V+ + E+ + NIIK N G+++ L+ TV+ Y +VP
Sbjct: 469 KSFLVLGFSNENESNIANIIKENAGKIMSLLSR--TVADYAVVP 510
>BC042541-1|AAH42541.1| 630|Homo sapiens tripartite
motif-containing 25 protein.
Length = 630
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 242 EVIGSSCYQCGTHIWIIERHKN 177
+V+G CY+ G H W +E KN
Sbjct: 500 QVLGLHCYKKGIHYWEVELQKN 521
>BC016924-1|AAH16924.1| 630|Homo sapiens tripartite
motif-containing 25 protein.
Length = 630
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 242 EVIGSSCYQCGTHIWIIERHKN 177
+V+G CY+ G H W +E KN
Sbjct: 500 QVLGLHCYKKGIHYWEVELQKN 521
>AB208994-1|BAD92231.1| 644|Homo sapiens tripartite
motif-containing 25 variant protein.
Length = 644
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 242 EVIGSSCYQCGTHIWIIERHKN 177
+V+G CY+ G H W +E KN
Sbjct: 514 QVLGLHCYKKGIHYWEVELQKN 535
>AB019397-1|BAA34202.1| 1435|Homo sapiens DNA topoisomerase II
binding protein protein.
Length = 1435
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 57 KSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVP 188
KSF V+ + E+ + NIIK N G+++ L+ TV+ Y +VP
Sbjct: 469 KSFLVLGFSNENESNIANIIKENAGKIMSLLSR--TVADYAVVP 510
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,942,937
Number of Sequences: 237096
Number of extensions: 1643579
Number of successful extensions: 7783
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 7574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7777
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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