Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D07f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC088366-1|AAH88366.1|  393|Homo sapiens C1orf59 protein protein.      54   4e-07
BC012198-1|AAH12198.1|  393|Homo sapiens chromosome 1 open readi...    54   4e-07
AL160171-4|CAI12931.1|  424|Homo sapiens chromosome 1 open readi...    54   4e-07
AL160171-3|CAI12930.1|  316|Homo sapiens chromosome 1 open readi...    54   4e-07
AL160171-2|CAI12929.1|  393|Homo sapiens chromosome 1 open readi...    54   4e-07
AK055087-1|BAB70852.1|  393|Homo sapiens protein ( Homo sapiens ...    54   4e-07
L12065-1|AAA02588.1|  106|Homo sapiens immunoglobulin kappa-chai...    31   3.2  
U35636-1|AAB02621.1| 2472|Homo sapiens nebulin protein.                29   9.9  
BC050436-1|AAH50436.1|  428|Homo sapiens NEB protein protein.          29   9.9  
AC107052-1|AAY14977.1| 3867|Homo sapiens unknown protein.              29   9.9  

>BC088366-1|AAH88366.1|  393|Homo sapiens C1orf59 protein protein.
          Length = 393

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = +1

Query: 190 FAEYDDEKGVIFFPPMYVQRYAAIVDCLLDERWSGKLEKVVDLGYHDMSFIKYLKEVSGI 369
           F E   E  + F PP+Y QRY  + + L+D+    + +KV DLG  D S ++ LK    I
Sbjct: 16  FEEVPRETAIQFKPPLYRQRYQFVKN-LVDQH---EPKKVADLGCGDTSLLRLLKVNPCI 71

Query: 370 KSILGVDLETIPLQCSSDLLS--CNEYAPKRETPLQISLLQGNAADPDYRLI 519
           + ++GVD+    L+   D L+    ++   R+  L I+L  G+  + D RL+
Sbjct: 72  ELLVGVDINEDKLRWRGDSLAPFLGDFLKPRDLNLTITLYHGSVVERDSRLL 123


>BC012198-1|AAH12198.1|  393|Homo sapiens chromosome 1 open reading
           frame 59 protein.
          Length = 393

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = +1

Query: 190 FAEYDDEKGVIFFPPMYVQRYAAIVDCLLDERWSGKLEKVVDLGYHDMSFIKYLKEVSGI 369
           F E   E  + F PP+Y QRY  + + L+D+    + +KV DLG  D S ++ LK    I
Sbjct: 16  FEEVPRETAIQFKPPLYRQRYQFVKN-LVDQH---EPKKVADLGCGDTSLLRLLKVNPCI 71

Query: 370 KSILGVDLETIPLQCSSDLLS--CNEYAPKRETPLQISLLQGNAADPDYRLI 519
           + ++GVD+    L+   D L+    ++   R+  L I+L  G+  + D RL+
Sbjct: 72  ELLVGVDINEDKLRWRGDSLAPFLGDFLKPRDLNLTITLYHGSVVERDSRLL 123


>AL160171-4|CAI12931.1|  424|Homo sapiens chromosome 1 open reading
           frame 59 protein.
          Length = 424

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = +1

Query: 190 FAEYDDEKGVIFFPPMYVQRYAAIVDCLLDERWSGKLEKVVDLGYHDMSFIKYLKEVSGI 369
           F E   E  + F PP+Y QRY  + + L+D+    + +KV DLG  D S ++ LK    I
Sbjct: 16  FEEVPRETAIQFKPPLYRQRYQFVKN-LVDQH---EPKKVADLGCGDTSLLRLLKVNPCI 71

Query: 370 KSILGVDLETIPLQCSSDLLS--CNEYAPKRETPLQISLLQGNAADPDYRLI 519
           + ++GVD+    L+   D L+    ++   R+  L I+L  G+  + D RL+
Sbjct: 72  ELLVGVDINEDKLRWRGDSLAPFLGDFLKPRDLNLTITLYHGSVVERDSRLL 123


>AL160171-3|CAI12930.1|  316|Homo sapiens chromosome 1 open reading
           frame 59 protein.
          Length = 316

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = +1

Query: 190 FAEYDDEKGVIFFPPMYVQRYAAIVDCLLDERWSGKLEKVVDLGYHDMSFIKYLKEVSGI 369
           F E   E  + F PP+Y QRY  + + L+D+    + +KV DLG  D S ++ LK    I
Sbjct: 16  FEEVPRETAIQFKPPLYRQRYQFVKN-LVDQH---EPKKVADLGCGDTSLLRLLKVNPCI 71

Query: 370 KSILGVDLETIPLQCSSDLLS--CNEYAPKRETPLQISLLQGNAADPDYRLI 519
           + ++GVD+    L+   D L+    ++   R+  L I+L  G+  + D RL+
Sbjct: 72  ELLVGVDINEDKLRWRGDSLAPFLGDFLKPRDLNLTITLYHGSVVERDSRLL 123


>AL160171-2|CAI12929.1|  393|Homo sapiens chromosome 1 open reading
           frame 59 protein.
          Length = 393

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = +1

Query: 190 FAEYDDEKGVIFFPPMYVQRYAAIVDCLLDERWSGKLEKVVDLGYHDMSFIKYLKEVSGI 369
           F E   E  + F PP+Y QRY  + + L+D+    + +KV DLG  D S ++ LK    I
Sbjct: 16  FEEVPRETAIQFKPPLYRQRYQFVKN-LVDQH---EPKKVADLGCGDTSLLRLLKVNPCI 71

Query: 370 KSILGVDLETIPLQCSSDLLS--CNEYAPKRETPLQISLLQGNAADPDYRLI 519
           + ++GVD+    L+   D L+    ++   R+  L I+L  G+  + D RL+
Sbjct: 72  ELLVGVDINEDKLRWRGDSLAPFLGDFLKPRDLNLTITLYHGSVVERDSRLL 123


>AK055087-1|BAB70852.1|  393|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30525 fis, clone BRAWH2000944, weakly similar to
           Arabidopsis thaliana pollenless3 (178) gene. ).
          Length = 393

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = +1

Query: 190 FAEYDDEKGVIFFPPMYVQRYAAIVDCLLDERWSGKLEKVVDLGYHDMSFIKYLKEVSGI 369
           F E   E  + F PP+Y QRY  + + L+D+    + +KV DLG  D S ++ LK    I
Sbjct: 16  FEEVPRETAIQFKPPLYRQRYQFVKN-LVDQH---EPKKVADLGCGDTSLLRLLKVNPCI 71

Query: 370 KSILGVDLETIPLQCSSDLLS--CNEYAPKRETPLQISLLQGNAADPDYRLI 519
           + ++GVD+    L+   D L+    ++   R+  L I+L  G+  + D RL+
Sbjct: 72  ELLVGVDINEDKLRWRGDSLAPFLGDFLKPRDLNLTITLYHGSVVERDSRLL 123


>L12065-1|AAA02588.1|  106|Homo sapiens immunoglobulin kappa-chain
           protein.
          Length = 106

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -3

Query: 261 NSSISLYIHWWEE--NNAFFIVIFGENIFIGFIVIRFKGTFSE 139
           + SI  Y+HW+++   NA  ++I   +  +G +  RF GT SE
Sbjct: 26  SQSIGRYLHWYQQKAGNAPKLLISATSNLVGGVPSRFSGTGSE 68


>U35636-1|AAB02621.1| 2472|Homo sapiens nebulin protein.
          Length = 2472

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 193 AEYDDEKGVIFFPPMYVQRYAAI 261
           AEY+++KG  +FP    Q Y AI
Sbjct: 428 AEYEEDKGKCYFPQTITQEYEAI 450


>BC050436-1|AAH50436.1|  428|Homo sapiens NEB protein protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 193 AEYDDEKGVIFFPPMYVQRYAAI 261
           AEY+++KG  +FP    Q Y AI
Sbjct: 340 AEYEEDKGKCYFPQTITQEYEAI 362


>AC107052-1|AAY14977.1| 3867|Homo sapiens unknown protein.
          Length = 3867

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 193 AEYDDEKGVIFFPPMYVQRYAAI 261
           AEY+++KG  +FP    Q Y AI
Sbjct: 707 AEYEEDKGKCYFPQTITQEYEAI 729


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,061,776
Number of Sequences: 237096
Number of extensions: 1335826
Number of successful extensions: 2697
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2691
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)