Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306D07f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069325-1|AAL39470.1| 391|Drosophila melanogaster LD04449p pro... 73 3e-13
AE013599-1399|AAF58575.2| 391|Drosophila melanogaster CG12367-P... 73 3e-13
U87613-1|AAC33180.1| 1036|Drosophila melanogaster seven-pass mem... 30 1.7
BT003246-1|AAO25003.1| 1036|Drosophila melanogaster LD34308p pro... 30 1.7
AF030334-1|AAB84275.1| 1036|Drosophila melanogaster smoothened p... 30 1.7
AE014134-73|AAF51518.2| 1036|Drosophila melanogaster CG11561-PA ... 30 1.7
AY122269-1|AAM52781.1| 403|Drosophila melanogaster SD25933p pro... 29 5.1
AF491289-1|AAN37397.1| 188|Drosophila melanogaster intersex pro... 28 8.8
AE013599-1287|AAF58653.1| 188|Drosophila melanogaster CG13201-P... 28 8.8
>AY069325-1|AAL39470.1| 391|Drosophila melanogaster LD04449p
protein.
Length = 391
Score = 72.5 bits (170), Expect = 3e-13
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Frame = +1
Query: 208 EKGVIFFPPMYVQRYAAIVDCLLDERWSGKLEKVVDLGYHDMSFIKYLKEVSGIKSILGV 387
E G+ F PP+Y QRY A + L D RW +++KVV+ G +M F + ++ + I+ I V
Sbjct: 16 ETGITFDPPVYEQRYCATIQILEDARWKDQIKKVVEFGCAEMRFFQLMRRIETIEHIGLV 75
Query: 388 DLETIPLQCSSDLLS--CNEYAPKRETPLQISLLQGNAADPDYRL 516
D++ L + ++ ++Y R +PL++ +LQGN AD L
Sbjct: 76 DIDKSLLMRNLTSVNPLVSDYIRSRASPLKVQILQGNVADSSEEL 120
>AE013599-1399|AAF58575.2| 391|Drosophila melanogaster CG12367-PA
protein.
Length = 391
Score = 72.5 bits (170), Expect = 3e-13
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Frame = +1
Query: 208 EKGVIFFPPMYVQRYAAIVDCLLDERWSGKLEKVVDLGYHDMSFIKYLKEVSGIKSILGV 387
E G+ F PP+Y QRY A + L D RW +++KVV+ G +M F + ++ + I+ I V
Sbjct: 16 ETGITFDPPVYEQRYCATIQILEDARWKDQIKKVVEFGCAEMRFFQLMRRIETIEHIGLV 75
Query: 388 DLETIPLQCSSDLLS--CNEYAPKRETPLQISLLQGNAADPDYRL 516
D++ L + ++ ++Y R +PL++ +LQGN AD L
Sbjct: 76 DIDKSLLMRNLTSVNPLVSDYIRSRASPLKVQILQGNVADSSEEL 120
>U87613-1|AAC33180.1| 1036|Drosophila melanogaster seven-pass
membrane protein protein.
Length = 1036
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 236 CMYSDMLLLSTVYWTNGGAENWKRW 310
C++S +++ST WT E WKR+
Sbjct: 542 CLFSSGIVMSTWCWTPSSIETWKRY 566
>BT003246-1|AAO25003.1| 1036|Drosophila melanogaster LD34308p
protein.
Length = 1036
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 236 CMYSDMLLLSTVYWTNGGAENWKRW 310
C++S +++ST WT E WKR+
Sbjct: 542 CLFSSGIVMSTWCWTPSSIETWKRY 566
>AF030334-1|AAB84275.1| 1036|Drosophila melanogaster smoothened
protein.
Length = 1036
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 236 CMYSDMLLLSTVYWTNGGAENWKRW 310
C++S +++ST WT E WKR+
Sbjct: 542 CLFSSGIVMSTWCWTPSSIETWKRY 566
>AE014134-73|AAF51518.2| 1036|Drosophila melanogaster CG11561-PA
protein.
Length = 1036
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 236 CMYSDMLLLSTVYWTNGGAENWKRW 310
C++S +++ST WT E WKR+
Sbjct: 542 CLFSSGIVMSTWCWTPSSIETWKRY 566
>AY122269-1|AAM52781.1| 403|Drosophila melanogaster SD25933p
protein.
Length = 403
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 295 KLEKVVDLGYHDMSFIKYLKEVSGIKS 375
K + V+ GYHD S +K++K +SG+ S
Sbjct: 371 KSDLVMLKGYHDCSSMKWIKAISGMPS 397
>AF491289-1|AAN37397.1| 188|Drosophila melanogaster intersex
protein.
Length = 188
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 313 DLGYHDMS-FIKYLKEVSGIKSILGVDLETIPLQCSSDLLSCNEYAPKRETPLQISLLQG 489
D G H + F K+L++ + + L+T +QC S N Y P TP+++
Sbjct: 90 DTGAHHVPRFDKHLEDFYACCDQIEIHLKTA-MQCLQQQNSSNHYLPGPVTPMRMETFMP 148
Query: 490 NAADP 504
+ A P
Sbjct: 149 DNAGP 153
>AE013599-1287|AAF58653.1| 188|Drosophila melanogaster CG13201-PA
protein.
Length = 188
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 313 DLGYHDMS-FIKYLKEVSGIKSILGVDLETIPLQCSSDLLSCNEYAPKRETPLQISLLQG 489
D G H + F K+L++ + + L+T +QC S N Y P TP+++
Sbjct: 90 DTGAHHVPRFDKHLEDFYACCDQIEIHLKTA-MQCLQQQNSSNHYLPGPVTPMRMETFMP 148
Query: 490 NAADP 504
+ A P
Sbjct: 149 DNAGP 153
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,539,040
Number of Sequences: 53049
Number of extensions: 412859
Number of successful extensions: 966
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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