Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14745-4|AAA27921.1|  419|Caenorhabditis elegans Hypothetical pr...    29   2.0  
L14745-3|AAM15539.1|  450|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U47144-3|AAB52619.1|  292|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ...    29   2.7  
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe...    28   3.5  
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe...    28   3.5  
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty...    28   3.5  
Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z46794-2|CAA86774.1|  950|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U55367-1|AAA97987.1|  281|Caenorhabditis elegans Hypothetical pr...    27   6.2  
L14331-8|AAA28100.1|  586|Caenorhabditis elegans C.elegans homeo...    27   6.2  
Z82287-2|CAB05312.1|  502|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z70753-12|CAA94761.2|  585|Caenorhabditis elegans Hypothetical p...    27   8.1  

>L14745-4|AAA27921.1|  419|Caenorhabditis elegans Hypothetical
           protein C02F5.6a protein.
          Length = 419

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
 Frame = +1

Query: 202 DDEKGVIFF-PPMYVQRYAAIVDCLLDERWSGKLE--KVVDLGYHDMSFIKYLKEV---S 363
           D E+   FF PP+ VQR + + + L++ + S +++  ++  +G  +MS  K + E     
Sbjct: 83  DHEQRKNFFQPPLQVQRNSFVKNTLMEFKRSSQIDISRLAVMGCGEMSLEKGICEYLGSF 142

Query: 364 GIKSILGVDLETIPLQCSSDLL 429
           G  ++L VD++   L     LL
Sbjct: 143 GTINVLSVDIDEPSLSIGQQLL 164


>L14745-3|AAM15539.1|  450|Caenorhabditis elegans Hypothetical
           protein C02F5.6b protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
 Frame = +1

Query: 202 DDEKGVIFF-PPMYVQRYAAIVDCLLDERWSGKLE--KVVDLGYHDMSFIKYLKEV---S 363
           D E+   FF PP+ VQR + + + L++ + S +++  ++  +G  +MS  K + E     
Sbjct: 83  DHEQRKNFFQPPLQVQRNSFVKNTLMEFKRSSQIDISRLAVMGCGEMSLEKGICEYLGSF 142

Query: 364 GIKSILGVDLETIPLQCSSDLL 429
           G  ++L VD++   L     LL
Sbjct: 143 GTINVLSVDIDEPSLSIGQQLL 164


>U47144-3|AAB52619.1|  292|Caenorhabditis elegans Hypothetical
           protein ZC53.6 protein.
          Length = 292

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = +1

Query: 313 DLGYHDMSFIKYLKEVSGIKSILGVDLETIPLQCS----SDLLSCNEYAPKRETPLQISL 480
           DLG      + +L   +G+K  +G ++   P +C+    S  +S  ++  K   PL+I L
Sbjct: 121 DLGSGVGQTVLFLSAFAGVKKSIGFEIMQYPSKCAELNRSHFISLMKHLGK--APLEIKL 178

Query: 481 LQGNAADPD 507
           + G+  D +
Sbjct: 179 IHGSFLDAE 187


>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
           protein Y80D3A.2 protein.
          Length = 1467

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 18  NFKLSTSYDYRYSNFNIFPPVSFNRIR*AFEAVLSKVRTVPH 143
           N +  T +DY   NFN+F   S   IR   E VL +++   H
Sbjct: 466 NLQFLTLHDYLLRNFNLFQLESTYEIRQDLEDVLFRMKPFQH 507


>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defective
            protein 19,isoform a protein.
          Length = 1783

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = -3

Query: 216  AFFIVI--FGENIFIGFIVIRF--KGTFSEGQCELLK 118
            AF IVI  F  NIF+GF+++ F  +G      CEL K
Sbjct: 1046 AFIIVIAFFMMNIFVGFVIVTFQNEGEREYENCELDK 1082


>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defective
            protein 19,isoform b protein.
          Length = 1877

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = -3

Query: 216  AFFIVI--FGENIFIGFIVIRF--KGTFSEGQCELLK 118
            AF IVI  F  NIF+GF+++ F  +G      CEL K
Sbjct: 1046 AFIIVIAFFMMNIFVGFVIVTFQNEGEREYENCELDK 1082


>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
            calcium channelalpha 1 subunit protein.
          Length = 1783

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = -3

Query: 216  AFFIVI--FGENIFIGFIVIRF--KGTFSEGQCELLK 118
            AF IVI  F  NIF+GF+++ F  +G      CEL K
Sbjct: 1046 AFIIVIAFFMMNIFVGFVIVTFQNEGEREYENCELDK 1082


>Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical
           protein K04G2.10 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 274 LDERWSGKLEKVVDLGYHDMSFIKYLKE 357
           ++++WS K EK+ D        +KY++E
Sbjct: 219 IEQKWSEKYEKLRDYALDQQDMVKYMEE 246


>Z46794-2|CAA86774.1|  950|Caenorhabditis elegans Hypothetical
           protein R06F6.2 protein.
          Length = 950

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 365 ESSQFWELILRLYHCSAHQTC*VVMSMHLKEKHHYKFHC 481
           ES +F   I+++  CSA  T   + ++H   KH Y  HC
Sbjct: 759 ESLKFNAQIMQVTKCSACDTPLQLPTVHFLCKHAYHVHC 797


>U55367-1|AAA97987.1|  281|Caenorhabditis elegans Hypothetical
           protein C55H1.1 protein.
          Length = 281

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 520 Q*VCNLGLLHCLGAVKFVMVFLF 452
           Q VC LG +H LG  K +M  L+
Sbjct: 103 QLVCGLGYMHALGIEKIIMASLY 125


>L14331-8|AAA28100.1|  586|Caenorhabditis elegans C.elegans homeobox
           protein 26 protein.
          Length = 586

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 337 NSYHGNQGLPPFPIFRSTVRPVDS 266
           N +  N G PPF I+ S + PV+S
Sbjct: 17  NGFSFNNGFPPFGIYYSQLPPVNS 40


>Z82287-2|CAB05312.1|  502|Caenorhabditis elegans Hypothetical
           protein ZK550.2 protein.
          Length = 502

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 428 NKSDEHCNGIVSRSTPKIDLIPETSFRYLMKLIS 327
           N SDE CN       PK DL+P     YL  ++S
Sbjct: 241 NSSDEKCNADYV-VVPKFDLVPALVCIYLYMIVS 273


>Z70753-12|CAA94761.2|  585|Caenorhabditis elegans Hypothetical
           protein F40F9.5 protein.
          Length = 585

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = -3

Query: 339 ETHIMVTKVYHLFQFSAPPFVQ*TVDNSSISLYIHWWEENNAFFIV-IFGENIFIGFIVI 163
           ET  ++T V  +  FS  P +   + N+  ++ + WW    AFF+   F   +FIG +VI
Sbjct: 473 ETARLLTVVSIIISFS--PILSSLIFNNIFNMTLTWW-PGFAFFVSGCFQITVFIGQLVI 529


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,216,932
Number of Sequences: 27780
Number of extensions: 223759
Number of successful extensions: 596
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)