Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D07f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g54380.1 68418.m06771 protein kinase family protein contains ...    31   0.62 
At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma m...    30   0.82 
At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem...    30   0.82 
At1g60160.1 68414.m06777 potassium transporter family protein si...    30   1.1  
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR...    29   1.4  
At4g26000.1 68417.m03745 KH domain-containing protein single-str...    29   2.5  
At1g06780.1 68414.m00721 glycosyl transferase family 8 protein c...    29   2.5  
At1g64970.1 68414.m07364 expressed protein                             28   3.3  
At1g19430.1 68414.m02421 dehydration-responsive protein-related ...    27   7.7  

>At5g54380.1 68418.m06771 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 855

 Score = 30.7 bits (66), Expect = 0.62
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +3

Query: 246 AICCYCRLSTGR---TVERKIGKGGRPWLP 326
           A+CCYC L   R   +   + G  G PWLP
Sbjct: 433 AVCCYCCLVASRKQRSTSPQEGGNGHPWLP 462


>At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma
            membrane-type / Ca(2+)-ATPase isoform 2 (ACA2) identical
            to SP|O81108 Calcium-transporting ATPase 2, plasma
            membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)
            {Arabidopsis thaliana}
          Length = 1014

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 222  NNAFFIVIFGENIFIGFIVIRFKGTFS 142
            +N  F+V+ G  +F   I+I F GTF+
Sbjct: 956  DNYVFVVVIGATVFFQIIIIEFLGTFA 982


>At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma
            membrane-type, putative / Ca2+-ATPase, putative (ACA7)
            identical to SP|O64806 Potential calcium-transporting
            ATPase 7, plasma  membrane-type (EC 3.6.3.8)
            (Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong
            similarity to SP|O81108 Calcium-transporting ATPase 2,
            plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
            2) {Arabidopsis thaliana}
          Length = 1015

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 222  NNAFFIVIFGENIFIGFIVIRFKGTFS 142
            +N  F+V+ G  +F   I+I F GTF+
Sbjct: 957  DNYVFVVVIGATVFFQIIIIEFLGTFA 983


>At1g60160.1 68414.m06777 potassium transporter family protein
           similar to potassium transporter HAK2p [Mesembryanthemum
           crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT
           Transporter family member, PMID:11500563; contains Pfam
           profile PF02705: K+ potassium transporter
          Length = 827

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +1

Query: 346 YLKEVSGIKSILGVDLETIPLQCSSDLLSCNEYAPKRETPLQISLLQGNAADPDYRL 516
           Y + V GI SI G  L T+P   S+ +  C +Y P    P +   L       DY +
Sbjct: 598 YNELVQGIPSIFGQFLLTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHM 654


>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1038

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = +1

Query: 274 LDERWSGKLEKVVDLGYHDMSFIKYLKEVSGIKSILGVDLETIPL-QCSS 420
           L++ W G ++ + +L   D+SF + LKE+  + +    +LET+ L +CSS
Sbjct: 615 LEKLWGG-IQSLTNLKNIDLSFSRKLKEIPNLSN--ATNLETLTLIKCSS 661


>At4g26000.1 68417.m03745 KH domain-containing protein
           single-stranded nucleic acid-binding protein CBP -
           mouse, PIR2:S78515
          Length = 495

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
 Frame = +1

Query: 241 VQRYAAIVDCLLDER---WSGKLEKVVDLGYHDMSFIKYLKEVSGIKSILGVDLETIPL- 408
           V+   A V  L +E    ++ + E++VDL    +  +K L+ + G      VD   +PL 
Sbjct: 192 VENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVDHTVVPLF 251

Query: 409 --QCSSDLLSCNEYAPKRETPLQISLLQGNAADPDYRLI 519
             Q  + +    +  P  E+   +  +  N  +PD+ L+
Sbjct: 252 EKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLL 290


>At1g06780.1 68414.m00721 glycosyl transferase family 8 protein
           contains Pfam profile: PF01501 glycosyl transferase
           family 8
          Length = 589

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +2

Query: 116 TFKSSHCPSLKVPLNLMTMNPMKMFSPNMTMKKALFSSHQCMYSDMLLLSTV 271
           T K  HC S+++     +++P K   PN         +H  ++SD +L S+V
Sbjct: 263 TPKGLHCLSMRLTSEYFSLDPEKRQMPNQQNYFDANFNHYVVFSDNVLASSV 314


>At1g64970.1 68414.m07364 expressed protein
          Length = 348

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 277 DERWSGKLEKVVDLGYHDMSFIKYLKEVSGIKSILGVDLETIPLQCSSDLLSCNEYAPK 453
           DE    K++KVVD+G       +YL    G + I G+ L  +  + ++DL +    A K
Sbjct: 120 DEEEEKKIKKVVDVGCGIGGSSRYLASKFGAECI-GITLSPVQAKRANDLAAAQSLAHK 177


>At1g19430.1 68414.m02421 dehydration-responsive protein-related low
           similarity to early-responsive to dehydration stress
           ERD3 protein [Arabidopsis thaliana] GI:15320410;
           contains Pfam profile PF03141: Putative
           methyltransferase
          Length = 724

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 20/75 (26%), Positives = 34/75 (45%)
 Frame = +1

Query: 259 IVDCLLDERWSGKLEKVVDLGYHDMSFIKYLKEVSGIKSILGVDLETIPLQCSSDLLSCN 438
           I + + D  W   +  V+D+G  D SF         + ++L  D+ T+ L    DL+   
Sbjct: 331 IQEMVPDIEWGKNVRIVLDIGCSDSSF---------VAALLDKDVLTVSLGLKDDLVDLA 381

Query: 439 EYAPKRETPLQISLL 483
           + A +R  P  +S L
Sbjct: 382 QVALERGFPTFVSSL 396


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,511,142
Number of Sequences: 28952
Number of extensions: 206688
Number of successful extensions: 578
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)