Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U50311-14|AAT92080.1|   75|Caenorhabditis elegans Hypothetical p...    29   2.7  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF078783-1|AAK82900.1|  382|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical
           protein Y69H2.3d protein.
          Length = 432

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 234 CRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTCKKKSL 347
           CR   C  +E CVL +  C     + C   PTC+ K L
Sbjct: 236 CRAQNCPYNEECVLVQVTCI---RAPCNPIPTCRPKDL 270


>Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical
           protein Y69H2.3a protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 234 CRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTCKKKSL 347
           CR   C  +E CVL +  C     + C   PTC+ K L
Sbjct: 341 CRAQNCPYNEECVLVQVTCI---RAPCNPIPTCRPKDL 375


>U50311-14|AAT92080.1|   75|Caenorhabditis elegans Hypothetical
           protein C25E10.13 protein.
          Length = 75

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +3

Query: 231 TCRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTC 332
           +C D+ C     C     PC  G T  C T P C
Sbjct: 40  SCEDVKCFGQNSCRTVAPPCIPGKT--CPTQPLC 71


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 234  CRDIGCLNSEVCVLAEDPCTFGHTSNCGTYPTCKKKSLVEG 356
            C  + C N++VC+L +  C       C   PTC+K     G
Sbjct: 1805 CEHVECPNAQVCILRKADCP---NKWCLPVPTCEKSPCNSG 1842


>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical protein
            R09H10.5 protein.
          Length = 1603

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 234  CRD-IGCLNSEVCVLAEDPCTFGHTSNCGTYPTCK 335
            C D IGC+N  + +     C  G+TS     PTC+
Sbjct: 1072 CSDLIGCINGGIMLGGNCQCVNGYTSLHCEVPTCQ 1106


>AF078783-1|AAK82900.1|  382|Caenorhabditis elegans Hypothetical
           protein H10E21.2 protein.
          Length = 382

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +2

Query: 257 QRSLRACRRSVHVWSHKQLRHISYMQEEVPCRRIACSRT 373
           Q  LR C   V     K+  H+ Y    V C  + CSR+
Sbjct: 109 QGVLRICSNDVTQMLQKEAEHMEYCISAVLCYGVDCSRS 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,877,849
Number of Sequences: 27780
Number of extensions: 243149
Number of successful extensions: 667
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)