Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.94 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.2  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   2.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   2.9  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   2.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   6.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.7  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   8.7  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 275 LLSIQNFLAIFPWGTACVHYTIYCR*IQFV*FVATILVLLVANWKD-HILRFFVLKFFHC 451
           LL I +F   F   T  +H    C    F+ F   +L LL  ++   H+L    + +F+ 
Sbjct: 163 LLCIYHFFCAFIIFT--MHLLFCCA---FIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYS 217

Query: 452 HFLIYTLFQITHTVL 496
            F+I+T+  + + VL
Sbjct: 218 AFIIFTIHLLFYCVL 232



 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 425 FFVLKFFHCHFLIYTLFQITHTVLXFRSF 511
           F V   F+C F+I+T+  +  T   + +F
Sbjct: 79  FTVHLLFYCPFIIFTVHFLLCTYYFYYAF 107



 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 413 HILRFFVLKFFHCHFLIYTL 472
           H+L    +  F C F+I+T+
Sbjct: 159 HLLFLLCIYHFFCAFIIFTM 178


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +2

Query: 416 ILRFFVLKFFHCHFLIYTLFQITHTVLXFRSFF 514
           + ++++ + F  +    T+F I H+VL  + FF
Sbjct: 143 MFQYYIGRSFTYYVCNTTIFLIFHSVLPIKRFF 175


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = -1

Query: 485 ELFEKGYKSKNDNEKILKQKIVGYDPSSLPPTKQELLQQIKRTVF 351
           +L E     KND+   L+  +        PP + E  QQ     F
Sbjct: 110 QLDENKLDKKNDDSPALRALLTRPQAKKTPPNQYENFQQYDNNNF 154


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
 Frame = +2

Query: 443 FHCHFLIYTLF---QITH--TVLXFRSFFGF 520
           FHCHFL + +     I H  T L +R F  F
Sbjct: 669 FHCHFLFHIVIGMNLIIHVGTQLIYRPFSHF 699


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = -1

Query: 485 ELFEKGYKSKNDNEKILKQKIVGYDPSSLPPTKQELLQQIKRTVF 351
           +L E     KND+   L+  +        PP + E  QQ     F
Sbjct: 110 QLDENKLDKKNDDSPALRALLTRPQAKKTPPNQYENFQQYDNNNF 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 443 FHCHFLIY 466
           FHCHFL +
Sbjct: 669 FHCHFLFH 676


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +3

Query: 204 VRR*FFK*WTLGTIKPIIFIFTINYCPS 287
           VR+  +K W + ++   + +F    CP+
Sbjct: 141 VRKCLYKLWKMPSLSEFLSLFGTETCPA 168


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +3

Query: 204 VRR*FFK*WTLGTIKPIIFIFTINYCPS 287
           VR+  +K W + ++   + +F    CP+
Sbjct: 141 VRKCLYKLWKMPSLSEFLSLFGTETCPA 168


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = +2

Query: 251 NNIHIYHQLLSIQNFLAIFPWGTACVHYTIYC 346
           N   + + +   QNFL +    + C+    YC
Sbjct: 223 NLCQVANSIYGFQNFLFVLSTFSICITQFYYC 254


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 279 CPSKIFWQFFRGAPHVCI 332
           C  K++W+F +   H C+
Sbjct: 55  CELKLWWEFCQRNGHNCL 72


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 455 FLIYTLFQITHTVLXFRSFF 514
           F IYT   I  TV  F+S F
Sbjct: 84  FAIYTNLSILTTVTIFKSAF 103


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 284 WTIIDGKYEY 255
           WT+I G+Y+Y
Sbjct: 693 WTLILGQYDY 702


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/27 (22%), Positives = 17/27 (62%)
 Frame = -1

Query: 377 LQQIKRTVFICNIWCNAHMRCPTEKLP 297
           L ++++   +C+ +C+ ++ C   K+P
Sbjct: 2   LLELEKVHELCDNFCHRYISCLKGKMP 28


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 392 LVANWKDHILRFFVLKFF 445
           L++  KD+  RF+  +FF
Sbjct: 308 LISTIKDNFPRFYAARFF 325


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 392 LVANWKDHILRFFVLKFF 445
           L++  KD+  RF+  +FF
Sbjct: 308 LISTIKDNFPRFYAARFF 325


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 340 YGVMHTCGAPRKNCQKI 290
           +G+M   G  RKN Q+I
Sbjct: 43  FGIMPLHGVSRKNVQEI 59


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -1

Query: 356 VFICNIWC 333
           +F+ NIWC
Sbjct: 128 IFVLNIWC 135


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +2

Query: 305 FPWGTACVHYTIYCR*IQFV*FVATILVLLVANWKDHILR 424
           FP  +AC ++TI  + +  V  V    ++++  + D I++
Sbjct: 350 FPVFSACDYFTIETKTVLDVLGVTVTYLIVIIQFDDKIVQ 389


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = +2

Query: 305 FPWGTACVHYTIYCR*IQFV*FVATILVLLVANWKDHILR 424
           FP  +AC ++TI  + +  V  V    ++++  + D I++
Sbjct: 276 FPVFSACDYFTIETKTVLDVLGVTVTYLIVIIQFDDKIVQ 315


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/27 (22%), Positives = 17/27 (62%)
 Frame = -1

Query: 377 LQQIKRTVFICNIWCNAHMRCPTEKLP 297
           L ++++   +C+ +C+ ++ C   K+P
Sbjct: 158 LLELEKVHELCDNFCHRYISCLKGKMP 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,928
Number of Sequences: 336
Number of extensions: 2365
Number of successful extensions: 22
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)