Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D03f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92782-2|CAB07188.1|  331|Caenorhabditis elegans Hypothetical pr...    32   0.29 
Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical pr...    31   0.66 
U55856-7|AAA98025.1|  249|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z75712-2|CAB00041.1|  254|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z68315-2|CAA92668.1|  535|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U80455-4|AAY55873.2|  315|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z81539-1|CAB04389.1|  228|Caenorhabditis elegans Hypothetical pr...    27   8.1  
L16685-7|AAO12394.1|  306|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF100656-10|AAF99967.1|  301|Caenorhabditis elegans Hypothetical...    27   8.1  

>Z92782-2|CAB07188.1|  331|Caenorhabditis elegans Hypothetical
           protein F14F8.3 protein.
          Length = 331

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
 Frame = +2

Query: 257 IHIYHQ---LLSIQNFLAIF--------PWGTACVHYTIYCR*IQFV*FVATILVLLVAN 403
           +H++H    L+++Q FL +F         +G    +  IY   + F+ F+ T L LL+ +
Sbjct: 115 VHVHHLIIFLMAVQRFLLVFFPSFEPLVTFGQKTTNKIIYT--LHFL-FILTHLGLLILD 171

Query: 404 WKDH--ILRFFVLKFFHCHFLIYTLFQITHTVL 496
           W ++   L      ++ C+F+   + QIT  +L
Sbjct: 172 WANYQGSLSQIPTLYYLCYFIFLNIIQITSAIL 204


>Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical
           protein T10B10.7 protein.
          Length = 818

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
 Frame = +2

Query: 278 LSIQNFLAIFPWGTACVHYTIYCR*IQFV-*FVATILVLLVANWKDHIL--RFFVLKFFH 448
           L I+N L +     + +H+  YCR ++FV  FV  +  ++V +    +L   FF++ F  
Sbjct: 566 LVIENLLVVCIVIMSTLHFLFYCRSLKFVGPFVLMVYKIIVRDMLRFLLIYSFFLMGFAQ 625

Query: 449 CHFLIY 466
             F+I+
Sbjct: 626 AFFVIF 631


>U55856-7|AAA98025.1|  249|Caenorhabditis elegans Hypothetical
           protein F31E8.1 protein.
          Length = 249

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 412 SYPTIFCFKIFSLSFFDLYPFSNNSYRPXIQIIFW 516
           S P  F F +FS+SFF  Y  S+NS    +  +FW
Sbjct: 161 SNPDFFIFFLFSISFFIFYATSSNS----LSRVFW 191


>Z75712-2|CAB00041.1|  254|Caenorhabditis elegans Hypothetical
           protein K04G2.4 protein.
          Length = 254

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -1

Query: 455 NDNEKILKQKIVGYDPSSLPPTKQELLQQIKRTVFICNIWCNAHMRCPTEKLPE 294
           ND  +   QK   + P      KQE+ Q++K+      +  N H+  PT KLP+
Sbjct: 64  NDTVEPTHQKTSAHVPEK-SIKKQEVKQEVKKHETTTVVHTNVHVPKPTHKLPQ 116


>Z68315-2|CAA92668.1|  535|Caenorhabditis elegans Hypothetical
           protein F28C6.2 protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -2

Query: 301 CQKILDGQ*LMVNMNIIGLMVPKVHHLKNYLLTYKSQISRVKKVKQMKMI 152
           C+KI +GQ L+ N ++I    P       Y + ++  + + K  KQM+ +
Sbjct: 431 CEKIQNGQSLLSNEDVIPGQKPFERMSNEYFVEWQMNLYKKKLAKQMEEV 480


>U80455-4|AAY55873.2|  315|Caenorhabditis elegans Hypothetical
           protein T01D1.7 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 322 MCA-LHHILQMNTVRLICCNNSCFVGGKLEGSYPTIFCFKIFSLSFF 459
           MC  +HHIL + TVR     +S F    + G +   +C+ + + + F
Sbjct: 16  MCLNIHHILVLITVRRFMKGSSFFFLFFVTGCFDVYYCYTLTTYNIF 62


>Z81539-1|CAB04389.1|  228|Caenorhabditis elegans Hypothetical
           protein F46A8.3 protein.
          Length = 228

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 470 GYKSKNDNEKILKQKIVGYDPSS 402
           GY S ND +K+ K  IV YD +S
Sbjct: 16  GYFSDNDRKKVKKISIVHYDSTS 38


>L16685-7|AAO12394.1|  306|Caenorhabditis elegans Hypothetical
           protein ZC21.6b protein.
          Length = 306

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -1

Query: 437 LKQKIVGYDPSSLPPTKQELLQQIKRTVFICNIWC 333
           +KQK+   D     P + ++ + + + VF+ N WC
Sbjct: 63  MKQKMDRCDSHICLPVETDMSRYVLQVVFVLNYWC 97


>AF100656-10|AAF99967.1|  301|Caenorhabditis elegans Hypothetical
           protein F49F1.11 protein.
          Length = 301

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 470 GYKSKNDNEKILKQKIVGYDPSS 402
           GY S ND +K+ K  IV YD +S
Sbjct: 16  GYFSDNDRKKVKKISIVHYDSTS 38


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,062,462
Number of Sequences: 27780
Number of extensions: 191468
Number of successful extensions: 636
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)