Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.31 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.31 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   6.6  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 421 FDVMKTENEDLQRKTKLLEEVTFSL 495
           FD++  ++ DLQ+K +  EEV  SL
Sbjct: 74  FDLISFKDSDLQQKLRYFEEVFSSL 98


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 421 FDVMKTENEDLQRKTKLLEEVTFSL 495
           FD++  ++ DLQ+K +  EEV  SL
Sbjct: 74  FDLISFKDSDLQQKLRYFEEVFSSL 98


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 209 GIFGATVDLFSTFVTLFGIVVDDGAVADLLIRGAA 105
           G+   TVDL   F TLF  ++    V  + ++ A+
Sbjct: 110 GVMVVTVDLHVFFFTLFNKLLGQYPVGIVGVKNAS 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.311    0.128    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,529
Number of Sequences: 336
Number of extensions: 1727
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.3 bits)