Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306D02f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 35 0.006
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 34 0.015
SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces pombe... 33 0.026
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 29 0.32
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 29 0.42
SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr... 29 0.42
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 29 0.42
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 29 0.56
SPBC12C2.01c ||SPBC17F3.03c|sequence orphan|Schizosaccharomyces ... 29 0.56
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 0.56
SPAP14E8.03 |bos1||SNARE Bos1|Schizosaccharomyces pombe|chr 1|||... 29 0.56
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 0.73
SPCC320.10 |srp72||signal recognition particle subunit Srp72|Sch... 28 0.97
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 28 0.97
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 1.3
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 27 1.3
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 27 1.3
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 27 1.3
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 1.7
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 27 2.2
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 2.2
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 27 2.2
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 27 2.2
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 26 3.0
SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr 3|||M... 26 3.0
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 3.0
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 26 3.9
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 3.9
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 26 3.9
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 3.9
SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 5.2
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 25 5.2
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 25 5.2
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 25 5.2
SPBC3H7.13 |||FHA domain protein Far10 |Schizosaccharomyces pomb... 25 5.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 5.2
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 25 6.8
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 25 6.8
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 25 6.8
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 25 6.8
SPBC428.03c |pho4||thiamine-repressible acid phosphatase Pho4|Sc... 25 9.0
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 25 9.0
SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccha... 25 9.0
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 25 9.0
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 25 9.0
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 25 9.0
SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr 3|... 25 9.0
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 35.1 bits (77), Expect = 0.006
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 283 LKDKHLEVS---DEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTENEDL 453
LK+ L++S EYE + ++ ++ + L+ L+ D N D+ KTE E L
Sbjct: 29 LKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKAD----NEDIQKTEAEQL 84
Query: 454 QRKTKLLEE 480
RK +LLEE
Sbjct: 85 SRKVELLEE 93
Score = 30.7 bits (66), Expect = 0.14
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 244 LEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNF 423
LE + K+ E T+ K + +V E+ + QS ERD ++ L T +Y ++K
Sbjct: 95 LETNDKLLRETTE-KMRQTDVKAEH--FERRVQSLERERDDMEQKLEEMTDKYTKVKAEL 151
Query: 424 DVMKTENEDL 453
D + EDL
Sbjct: 152 DEVHQALEDL 161
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 33.9 bits (74), Expect = 0.015
Identities = 20/101 (19%), Positives = 53/101 (52%)
Frame = +1
Query: 217 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTL 396
+ +++ N LLE K+K++ +L +++ + D +K+ + ++ LK +L
Sbjct: 805 NMQSQNNTLLESESKLKTDCENLTQQNMTLIDNVQKLMHKHVNQESKVSELKEVNGKLSL 864
Query: 397 EYDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELD 519
+ ++ + +V ++N+ + + L + SL+Q+S +L+
Sbjct: 865 DLKNLRSSLNVAISDNDQILTQLAELSKNYDSLEQESAQLN 905
Score = 33.5 bits (73), Expect = 0.020
Identities = 19/88 (21%), Positives = 41/88 (46%)
Frame = +1
Query: 256 KKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMK 435
K+ + F+ L ++++ +++++ Q+ + + + L LE + +
Sbjct: 598 KENEQNFSSLDTSFKKLNESHQELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLS 657
Query: 436 TENEDLQRKTKLLEEVTFSLKQKSFELD 519
EN DL+ K LEE SL +K ++D
Sbjct: 658 DENNDLRTKLLKLEESNKSLIKKQEDVD 685
Score = 29.1 bits (62), Expect = 0.42
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +1
Query: 265 KSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTEN 444
K E + ++ ++ +E + + +D L +LS + E+D +K D + +N
Sbjct: 286 KLEKCAINEEDSKLLEELKHNVANYSDAIVHKDKLIEDLSTRISEFDNLKSERDTLSIKN 345
Query: 445 EDLQRKTKLLEEVTFSLK 498
E L+ KLL SLK
Sbjct: 346 EKLE---KLLRNTIGSLK 360
Score = 26.2 bits (55), Expect = 3.0
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Frame = +1
Query: 223 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEY 402
K +L +++ + L KH+ + ++KE S + L+++L+V +
Sbjct: 821 KTDCENLTQQNMTLIDNVQKLMHKHVNQESKVSELKEVNGKLSLDLKNLRSSLNVAISDN 880
Query: 403 D-------EIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFEL 516
D E+ N+D ++ E+ L K LE L ++ EL
Sbjct: 881 DQILTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENEEL 925
Score = 25.0 bits (52), Expect = 6.8
Identities = 20/86 (23%), Positives = 39/86 (45%)
Frame = +1
Query: 241 LLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVN 420
L+E SEF +LK + +S + EK+++ ++ + + S E E+K +
Sbjct: 320 LIEDLSTRISEFDNLKSERDTLSIKNEKLEKLLRNTIGSLKDSRTSNSQLEEEMVELKES 379
Query: 421 FDVMKTENEDLQRKTKLLEEVTFSLK 498
+ ++ D + K E+ SLK
Sbjct: 380 NRTIHSQLTDAESKLSSFEQENKSLK 405
>SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 396
Score = 33.1 bits (72), Expect = 0.026
Identities = 18/86 (20%), Positives = 40/86 (46%)
Frame = +1
Query: 262 MKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTE 441
+K E ++K + + ++ IK E I+K+++ E E+K +MK +
Sbjct: 185 IKGEMAEMKGEMTVMKNDIASIKGEMAEMKGEMTIMKSDIDSVKGEMAEMKGEMTIMKND 244
Query: 442 NEDLQRKTKLLEEVTFSLKQKSFELD 519
+ ++ +T L+ ++K +LD
Sbjct: 245 IDSVKGETTTLKGEVTAMKDSISQLD 270
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 29.5 bits (63), Expect = 0.32
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 241 LLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERD 363
L+EK+ K E DL ++ L +YEK+ E QS S R+
Sbjct: 334 LIEKYASQKEELMDLNERLLVARRDYEKLYE--QSMSEMRN 372
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 29.1 bits (62), Expect = 0.42
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 166 VTKVEKRSTVAPKIPPYDFKARFNDLLE-KHKKMKSEFTDLKDKHLEVSDEYEKIKETFQ 342
+ V S++ P P D R +L +H+K++ DL K + EY +E +
Sbjct: 884 IVSVVGMSSMQP--PIRDLLPRLTPILRNRHEKVQENTIDLVGKIADRGSEYVSAREWMR 941
Query: 343 SCSNERDILKAN 378
C D+LKA+
Sbjct: 942 ICFELIDMLKAH 953
>SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 319
Score = 29.1 bits (62), Expect = 0.42
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 223 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVK--TL 396
+ARF + + +K+ F +++ H ++S +K + CS+ D L+AN+ + T
Sbjct: 68 EARFRNQSQTEDLLKNFFPEIQTIHKKISQVQSLLKIIEKKCSS--DFLEANVKSQFTTC 125
Query: 397 EYDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFE 513
E + K ++ ++ K LE V+F+ + KS E
Sbjct: 126 ENKDSKEDYQIL---------HNKRLEYVSFNDELKSLE 155
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 29.1 bits (62), Expect = 0.42
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Frame = +1
Query: 238 DLLEKHKKMKSEFTDLKDKHLEVSDEYEKIK------ETFQSCSNERDILKANLSVKTLE 399
+LL+KH+ S + D+ E+ D Y K + F+ + + AN + TL+
Sbjct: 491 ELLDKHQTALSSVENRLDEISEIVDSYHKYSGVRTKLQVFEENKTNKSAILAN-QLMTLK 549
Query: 400 YDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQK 504
+V +K ++ + KL+E+V L++K
Sbjct: 550 SSFSEVMSYELKDDDNYNEELDKLVEDVRKKLQEK 584
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/100 (19%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +1
Query: 229 RFNDLLEKHKKMKSEFTD---LKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLE 399
R + + K +++ E T+ L+D+ + ++EYE+ T + ++ DI+ ++ +
Sbjct: 231 RISCIRSKVEELDQEITETARLQDELFKSTEEYEQQMITIRHLESQSDIINTTINDLKSQ 290
Query: 400 YDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELD 519
+ + ++ + + K K +E+ SL++K +L+
Sbjct: 291 MTITDESSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLE 330
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.7 bits (61), Expect = 0.56
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 250 KHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNER--DILKANLSVKTLEYDEIKVNF 423
+++ KS+ DL ++ V D+ K+ +F+ NE+ + LS T EYD +
Sbjct: 933 RYRIQKSKVDDLHEQLKFVKDKLNKM--SFKKKKNEQRSQSFQVELSNLTSEYDTTTESI 990
Query: 424 DVMKTENEDLQR 459
+KTE + L +
Sbjct: 991 ATLKTELQSLNK 1002
>SPBC12C2.01c ||SPBC17F3.03c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 318
Score = 28.7 bits (61), Expect = 0.56
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 217 DFKARFNDLLEKHKKMKSEFTDLKD 291
DFK+RF+ E H K+ +E ++KD
Sbjct: 116 DFKSRFSQYRESHLKLLNELQNVKD 140
Score = 25.4 bits (53), Expect = 5.2
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 265 KSEFTDLKDKHLEVSDEYEKIKET 336
KS F+ ++ HL++ +E + +K+T
Sbjct: 118 KSRFSQYRESHLKLLNELQNVKDT 141
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.7 bits (61), Expect = 0.56
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Frame = +1
Query: 325 IKETFQSCSNERDILKANLSVKTLEYDEIKVN-------FDVMKTENEDLQRKTKLLEE 480
+++ QS +N+ + + +SV E + +K N FD + TEN+ L+R L+E
Sbjct: 75 LEQQLQSSNNQAEESRNLISVLRNENESLKTNLENQNKRFDALTTENQSLRRANSELQE 133
>SPAP14E8.03 |bos1||SNARE Bos1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 235
Score = 28.7 bits (61), Expect = 0.56
Identities = 21/105 (20%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +1
Query: 190 TVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIK---ETFQSCSNER 360
+++ I YD + + K KK + + KH+++ ++++++K N +
Sbjct: 49 SLSRSIDDYDSMVQRELVPAKKKKATIRIQEFRQKHVQLLEKFDELKAHVRDIAQAKNRK 108
Query: 361 DILKANLSVKTLE--YDEIKVNFDVMKTENEDLQRKTKLLEEVTF 489
++L V +L+ Y + ++++ + DL R+ LL+E F
Sbjct: 109 ELLGRRGYVNSLDSPYGNSTTDAEIVEGPS-DLSRQDGLLKEHDF 152
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.3 bits (60), Expect = 0.73
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +1
Query: 241 LLEKHKKMKSEFTDLKDKHLEVSDEY--------EKIKETFQSCSNERDILKANLSVKTL 396
L +K ++ + TD+KD+ L+VS+E +K+ +F+ SNE+ L+ L +L
Sbjct: 661 LNDKISVLQRQLTDVKDE-LDVSEEEREEAIVAGQKLSASFELMSNEKQALE--LKYSSL 717
Query: 397 EYDEIKVNFDVMKTENEDLQRKTKLLEE 480
+ + I + + E E + KL EE
Sbjct: 718 KNELINAQNLLDRREEELSELSKKLFEE 745
>SPCC320.10 |srp72||signal recognition particle subunit
Srp72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 561
Score = 27.9 bits (59), Expect = 0.97
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = +1
Query: 88 GPPVSAAAPRIKRSATAPSSTTIPNNVTKVEKRSTVAPK 204
G PVSAA IKRS A SS N+ K KR PK
Sbjct: 491 GVPVSAAIGPIKRSVEANSS----NSSKKTRKRRKPTPK 525
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 27.9 bits (59), Expect = 0.97
Identities = 24/125 (19%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +1
Query: 118 IKRSATAPSSTTIPNNVTKVE-KRSTVAPKIPPY--DFKARFNDLLEKHKKMKSEFTDLK 288
++ S + + IP + + K + PK+ K +DL + + + + +D+K
Sbjct: 478 VRTSVPSQLAAPIPQVASAEQLKLAAEVPKLESQLSQVKKSNDDLQKSSRDVAANLSDVK 537
Query: 289 DKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTENEDLQRKTK 468
K E+ Y++ + S + + KA EY ++ + ++ +N ++K +
Sbjct: 538 AKVSEIRKAYDEELAKAKQISLDIETNKAQTEQVNREYSILEATLNALQKQN---KQKGE 594
Query: 469 LLEEV 483
+LE+V
Sbjct: 595 VLEQV 599
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 223 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDE-YEKIKETFQSCSNERDILKANLSVKTLE 399
++ D +E+H K+ + D+K++ +S + + + E +S S + K LE
Sbjct: 697 ESEIKDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEKSKSLNNSLAALESKNKKLE 756
Query: 400 YDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLK 498
D + + + + +N D + + E S K
Sbjct: 757 ND-LNLLTEKLNKKNADTESFKNTIREAELSKK 788
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 178 EKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEK 324
+K TV + +++KA + + + MK DL+ + +V D YE+
Sbjct: 42 QKTKTVEAQKDDFEYKAMISAQINEMALMKQTVMDLEMQQSKVKDRYEE 90
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 118 IKRSATAPSSTTIPNNVTKVEKRSTVAPKIPPYDFKARFND 240
I +SATA +++ + + + EK PK+ P KA +D
Sbjct: 63 IPKSATATTASAVSSELASYEKPKKEHPKLRPSKKKATLDD 103
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 27.5 bits (58), Expect = 1.3
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 286 KDKHLEVSD--EYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTENEDLQR 459
KD +E SD + ++K +F N D+L + E+KV+F+ K E++DL +
Sbjct: 261 KDGQVEKSDCSKNTQLKPSFLP-KNTDDLLNGT-DDNNIVLREVKVSFENEKIESDDLDK 318
Query: 460 KTKLLEEVTFSLKQKSFE 513
++ E ++ ++S E
Sbjct: 319 NEEISEGEEYTPIEESKE 336
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 27.1 bits (57), Expect = 1.7
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 244 LEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSC-SNERDILKANLSVKTLEYDEIKVN 420
LE +++ + ++ D + V + K +TFQ SNE + + AN K+L + K++
Sbjct: 470 LEPEEELVTRYSVSSDGNT-VDEAITKQSQTFQLVNSNEFNEVNANDVHKSLRQNCAKLD 528
Query: 421 FDVMKTEN 444
FD K++N
Sbjct: 529 FDDSKSKN 536
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.6 bits (56), Expect = 2.2
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 292 KHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTENEDLQRKTKL 471
K + S E EKI + +E + LKA + + N +++K E DL+ K
Sbjct: 224 KQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSSNNRNVEILKEEKNDLESKLYR 283
Query: 472 LEE 480
EE
Sbjct: 284 FEE 286
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.6 bits (56), Expect = 2.2
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +1
Query: 223 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDIL--KANLSVKTL 396
K R +++E ++K + + ++ + + + ER I K + +T
Sbjct: 827 KKRDAEIIELKYELKKQQNSKSEVERDLVETNNSLTAVENLLTTERAIALDKEEILRRTQ 886
Query: 397 E-YDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFE 513
E I+ +F K +NE+LQR++ L+++ L+ + E
Sbjct: 887 ERLANIEDSFSETKQQNENLQRESASLKQINNELESELLE 926
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 232 FNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNE 357
F+DL+ + + E ++L + L V + K+K + S NE
Sbjct: 68 FSDLIWTNGSIIKELSELSSQTLSVQSQLLKVKNSIDSYKNE 109
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 352 NERDILKANLSVKTLEYDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELD 519
N + + L VK+ + E K N + K ENE ++ V+ S + K+ E+D
Sbjct: 279 NGKQVGDLTLVVKSAVFREDKQNDENEKNENEPIEASESAPTNVSDSTEPKASEVD 334
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 3.0
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +1
Query: 247 EKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQS 345
E+ K + DLK+KH ++ +++ + E F++
Sbjct: 563 EELGKTLKQLNDLKEKHAQLQTKWKSVSEMFRN 595
>SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 609
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 91 PPVSAAAPRIKRSATAPSSTTIPNNVT 171
PPVSA + SAT+ SS+T P +T
Sbjct: 23 PPVSAKFAKRVLSATSSSSSTCPEFIT 49
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +1
Query: 397 EYDEIKVNFDVMKTENEDLQRKTKLLEEVT----FSLKQKSF 510
+ D ++ + + NE + + TK+LEEV+ +SLK++ F
Sbjct: 591 DLDGAEIQEETLIKANETIDQLTKMLEEVSDQLRYSLKERDF 632
Score = 24.6 bits (51), Expect = 9.0
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 229 RFNDLLEKHKKMKSEFTDLKDKHLEVSDEY-EKIKETFQSCSNERDILKANLSVKTLEYD 405
R +L E+ +K SE T H + D ++++E + S D+ K V E+
Sbjct: 1620 RIKELEEQAQKNSSENT-----HDNIDDMIKQQVEEKLKENSANFDV-KLKKVVAETEFR 1673
Query: 406 EIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQK 504
K V + + DLQ K LEE +L ++
Sbjct: 1674 S-KAKISVYEKKTRDLQNKITQLEETIENLNKQ 1705
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 142 SSTTIPNNVTKVEKRSTVAPKIPPYDFKARFNDL-LEKHKKMKSEFTDLKDKHLEVSDEY 318
SST++P+ K+E P +P + + + + L K KS+ + + E +
Sbjct: 422 SSTSVPDVPLKIESTVGKLPSLPKFKKRVDSSKMNLSAGSKTKSKLQRRRRRRHEARPLH 481
Query: 319 EKIKETFQSCSNERD 363
++ + + S ++E +
Sbjct: 482 YQLNQMYNSSASEAE 496
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 25.8 bits (54), Expect = 3.9
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 91 PPVSA-AAPRIKRSATAPSSTTIPNNVTKVEKRSTVAPKI 207
P SA AAP+++ A +S IPN T + +STVA I
Sbjct: 509 PAASAKAAPKLQEKA---ASFDIPNKSTIISTKSTVASPI 545
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 25.8 bits (54), Expect = 3.9
Identities = 21/95 (22%), Positives = 36/95 (37%)
Frame = +1
Query: 130 ATAPSSTTIPNNVTKVEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVS 309
+ A + I + K+E ST + P +++ D +E K++S ++LK
Sbjct: 258 SVAQDAANILQEILKIESTSTTSQIKPKCNYETEITDCME---KLQSNLSELKSSRKSSL 314
Query: 310 DEYEKIKETFQSCSNERDILKANLSVKTLEYDEIK 414
+ +F S D L L E D K
Sbjct: 315 ISLKSFWLSFYKVSLRYDALYEYLRQIAEELDRSK 349
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 3.9
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +1
Query: 217 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTL 396
D +++ DLLE + + + + KD+ L E+ K T ++ S + ++LS+
Sbjct: 1214 DITSKWKDLLESFECRRLKLENNKDEILRNFSEFAKRVNT-ETLSLISEWCASSLSLIKA 1272
Query: 397 EYDEIKVNFD 426
YDE D
Sbjct: 1273 NYDEFSSTVD 1282
>SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 404
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 319 EKIKETFQSCSNERDILKANLSVKTLE 399
+++KE CS R ILK N S LE
Sbjct: 168 QELKEVLSWCSEHRAILKKNNSTLELE 194
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 367 LKANLSVKTLEYDEIKVNFDVMKTENEDLQRKTKLLE----EVTFSLKQK 504
L+ L V T EY++++ +KT+N + R + ++ E+T ++Q+
Sbjct: 685 LQLKLQVVTSEYEKLETQLKDLKTQNANFHRLEQEIQLKQHELTLLIEQR 734
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 5.2
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = +1
Query: 229 RFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDE 408
+ N+ +++ KK SE + K K L DE + E S S E ++ L ++ ++++
Sbjct: 61 KLNNTIKQLKKSLSE-AETKLKRL---DEKQATPELQVSDSKE---MEEQLELQKSQFEK 113
Query: 409 IKVNFDVMKTENEDLQRKTKLLEEVT 486
+++ E EDLQRK +EE+T
Sbjct: 114 ---RISILEKEKEDLQRK---MEELT 133
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 25.4 bits (53), Expect = 5.2
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = +1
Query: 190 TVAP--KIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERD 363
T+AP KIPP KA D LE + +F + K + S Q+ SN+
Sbjct: 96 TIAPYQKIPPSKVKA---DSLEGSLEQDPKFQEFKVQRESYS----------QTASNDDV 142
Query: 364 ILKANLSVKTLEYDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKS 507
I K S L+Y K N V K +++ ++ K +++ + K S
Sbjct: 143 IEKLQTSTPLLQYLAEKKNAVVEKGKSKPSKKSVKAKKKLRLAEKPAS 190
>SPBC3H7.13 |||FHA domain protein Far10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 25.4 bits (53), Expect = 5.2
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 16 TIANGLSDVDKKN--LITNHTRPLRNGPPVS-AAAPRIKRSATAPSSTTIPNNVTKVEKR 186
++ NG+ +V K L T TR RN S ++P I S PS+ + + KR
Sbjct: 170 SLENGVEEVSKSLSWLETGKTRDNRNNHHYSRKSSPHIS-SLAVPSTKHLDGERDRNLKR 228
Query: 187 STVAPKIPPYDFKARFND 240
ST P+ +A N+
Sbjct: 229 STSPLSSSPFVTEAALNE 246
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 70 TRPLRNGPPVSAAAPRIKRSATAPSSTTIPNNVTKVEKRSTVAPKI 207
T PL+ S A+P SAT SST + +T++ + K+
Sbjct: 903 TPPLKQDVTESKASPVADASATHQSSTGLTQEITQLGSNMRLPTKL 948
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 25.0 bits (52), Expect = 6.8
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 217 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSV--- 387
DF + L E+ K KSE ++LK + + E I+ + + ++ L+ L +
Sbjct: 633 DFNNKIKALREEKKAWKSEESELKSSIESLISQLESIRNSQIDIAFSKNQLELKLQLYET 692
Query: 388 KTLEYDE 408
K EY++
Sbjct: 693 KLKEYEQ 699
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 277 TDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTL--EYDEIKVNFD 426
T + ++VS E F CS ++D+L+ N + + E + + FD
Sbjct: 21 TTMVSPSIDVSSSPRPNVERFSPCSTKKDLLEGNNIMTRIPEELSRVSLQFD 72
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/82 (18%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 238 DLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKA-NLSVKTLEYDEIK 414
D+ + + + + L+ K E S+ + + + D+ A +L K+ +Y +K
Sbjct: 319 DITSEKSALDAYYATLRAKQKEESEFMDSENVDDEEDDDFLDVTTATSLQNKSTDYGSVK 378
Query: 415 VNFDVMKTENEDLQRKTKLLEE 480
+ + ++++ ++TK +EE
Sbjct: 379 RKTENLNSDSDIQNKRTKSIEE 400
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 409 IKVNFDVMKTENEDLQRKTKLLEEVTFS 492
I V+ M ENEDLQ +T+ +++V S
Sbjct: 661 IVVSRKTMSVENEDLQSETEDIDQVPTS 688
>SPBC428.03c |pho4||thiamine-repressible acid phosphatase
Pho4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 463
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 326 IFSYSSETSKCLSFKSVNSLFIFLCFSNK 240
IF+YS +TS + F +FLC NK
Sbjct: 369 IFTYSLKTSSFVPFAGNLITELFLCSDNK 397
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 24.6 bits (51), Expect = 9.0
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 272 SLFIFLCFSNKSLNLALKS*GGIFGATV--DLFSTFVTLFGIVVDD 141
S F+ LCF N L+++ IF A V DLF+T + ++ +++DD
Sbjct: 1647 SEFVILCF-NAFLDVS-----NIFPAIVRVDLFATAMHVYEVIMDD 1686
>SPAC823.13c |||mitochondrial inner membrane
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +1
Query: 250 KHKKMKSEFTDL--KDKHLEVSDEYEKIKE 333
K K++ E D K++ LE++DE +KI E
Sbjct: 190 KRKRLVREAVDHIDKERELEINDELKKISE 219
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 24.6 bits (51), Expect = 9.0
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +1
Query: 175 VEKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKI---KETFQS 345
V + +T A + + N+ EK +++ E L+ E+ +E EK+ ++ F +
Sbjct: 180 VHEENTAALDSEIDELMKQINEKEEKIEEISDETDKLQKLLRELDEEKEKVYAEEQEFYN 239
Query: 346 CSNERDILKANLSVKTLEYDEIKVNFDVMKTENEDLQR 459
N+ I K +L +YD + F+ + E LQ+
Sbjct: 240 NLNQFQIKKLSLE---RQYDCANLEFEHNSRKLEKLQK 274
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 24.6 bits (51), Expect = 9.0
Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 1/117 (0%)
Frame = +1
Query: 13 RTIANGLSDVDKKNLITNHTRPLRNGPPVSAAAPRIKRSATAPSSTTIPNNVTKVEKRST 192
R +A+ S+ + + P+ KR + SS +PN K E++ +
Sbjct: 124 RKMASDASEEKDRKIEEGELTSEEEKEPIQDLRKSHKRKSVEKSS--VPNKKHKAERKRS 181
Query: 193 VAPKIPPYDFKARFNDLL-EKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNER 360
+PKI + D+ +K ++ K D +D V + E E + +++R
Sbjct: 182 PSPKIEILEDDEEIEDVASDKDEEEKPWSGDEEDDDELVVKDSEDETEGVSTIASQR 238
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 232 FNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIK 330
FN L KK+K + DL ++ + D+ E+++
Sbjct: 242 FNQLRADKKKLKKDLKDLVEEFQPILDKGEELR 274
>SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr
3|||Manual
Length = 834
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/93 (19%), Positives = 35/93 (37%)
Frame = +1
Query: 232 FNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEI 411
F + ++ S D+ +D +I + CSN RD+ + +L + ++ +
Sbjct: 183 FYQSIRPNQGFMSVNVDISSSAFWRNDSLLQILMEYTDCSNVRDLTRFDLKRLSRKFRFL 242
Query: 412 KVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSF 510
KV DL + +E + SF
Sbjct: 243 KVTCQHRNNVGTDLANRVYSIEGFSSKSASDSF 275
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.128 0.346
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,691,274
Number of Sequences: 5004
Number of extensions: 30054
Number of successful extensions: 162
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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