Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D02f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    29   0.072
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       26   0.67 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.0  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   2.7  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   4.7  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 29.5 bits (63), Expect = 0.072
 Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
 Frame = +1

Query: 217 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTL 396
           DF+A           + SE    + K  +  D +EKI+   +   +E   ++   S K  
Sbjct: 699 DFRAELKQTEANINSIVSEMQKTETKQGKSKDAFEKIQADIRLMKDELSRIERFRSPKER 758

Query: 397 EYDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLK-QKSFELD 519
              + K N + M +  E L+   +L +E+   L  Q   E+D
Sbjct: 759 SLAQCKANLEAMTSTKEGLE--NELHQELMSQLSVQDQHEVD 798


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 26.2 bits (55), Expect = 0.67
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 358 RDILKANLSVKTLEYDEIKVNFDVMKTENEDLQRKTKLLEE 480
           +D+L+ N +V+  + +    NFD  KT  + +  + +++EE
Sbjct: 66  KDVLEQNYAVEVRDIERNDYNFDEPKTSLDPVVVEEEIIEE 106


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 16/88 (18%), Positives = 36/88 (40%)
 Frame = +1

Query: 241 LLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVN 420
           LLE+ +K+++E  +LK    E        +   + C ++    +  L      Y+E + +
Sbjct: 462 LLEEKEKLQTELIELKRAVDESKSALSIAESELKICQHDEVTERRKLESLRYSYEETEKD 521

Query: 421 FDVMKTENEDLQRKTKLLEEVTFSLKQK 504
            +  +   + L+    +      + KQK
Sbjct: 522 LEEKRARLQTLEEALPVTRTELETAKQK 549



 Score = 24.2 bits (50), Expect = 2.7
 Identities = 22/90 (24%), Positives = 36/90 (40%)
 Frame = +1

Query: 247 EKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFD 426
           E   K+ +    LKD+   + +E EK++          D  K+ LS+      E+K+   
Sbjct: 443 EVEAKLTANLATLKDETKVLLEEKEKLQTELIELKRAVDESKSALSIAE---SELKICQH 499

Query: 427 VMKTENEDLQRKTKLLEEVTFSLKQKSFEL 516
              TE   L+      EE    L++K   L
Sbjct: 500 DEVTERRKLESLRYSYEETEKDLEEKRARL 529


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +1

Query: 91  PPVSAAAPRIKRSATAPSSTTIPNNVTKVEKR-STVAPKIPPYDFKARFND 240
           P VS AAP       A       +  T+     STV   +PP    ARF+D
Sbjct: 789 PAVSTAAPVYTFKPFASRLRATESTATESSSTLSTVTTTLPPVVTTARFSD 839


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 16/97 (16%), Positives = 43/97 (44%)
 Frame = +1

Query: 217 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTL 396
           +  AR  ++ E+  K +     + ++ L+         E + + S E D+L+  + +   
Sbjct: 682 ELTARLVNVDEEKVKFERSCRTIIEQLLDQQRRKVAALERYAAASREHDLLEQRIRLFEE 741

Query: 397 EYDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKS 507
             ++ + NF +++   +  ++    +E+    +K KS
Sbjct: 742 RNNDREANFRLLEDAYQSAKKTLANVEKKLAEVKAKS 778


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.128    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,082
Number of Sequences: 2352
Number of extensions: 7032
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)