Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306D01f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0100 - 20076728-20077013,20077305-20077513                       28   5.2  
06_03_0725 - 23894215-23894412,23894660-23894803,23895058-238951...    27   9.1  

>11_06_0100 - 20076728-20077013,20077305-20077513
          Length = 164

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 401 EEEECGASWAGCWMRVKK 454
           E E C A  AGCW RV +
Sbjct: 146 ENERCSARTAGCWRRVDR 163


>06_03_0725 -
           23894215-23894412,23894660-23894803,23895058-23895126,
           23895197-23895267,23895357-23895444,23895522-23895707,
           23895805-23895903,23896002-23896082,23896575-23896634,
           23896656-23896779,23897026-23897120,23897205-23897331,
           23897559-23897662,23897883-23897945
          Length = 502

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 109 TNPLTYCYYNMNKIFLLFILF 47
           TN L +CYY +NK  + F+ F
Sbjct: 171 TNSLVHCYYELNKGTIRFLEF 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,018,856
Number of Sequences: 37544
Number of extensions: 98343
Number of successful extensions: 219
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)