Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306C12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   2.9  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   5.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   5.0  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   5.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.7  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 206 CGGSCEAPVSADH 168
           CGG CE P+  DH
Sbjct: 300 CGGECEYPI-PDH 311


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 359 YLCASSRCLCALVLICRR*RSEIATSSCSLLSRAV 255
           ++ A   CLC+L  I    +  +A   C+ L +A+
Sbjct: 213 HILAMLNCLCSLWFINCTAKGRVAVWMCNNLHKAL 247


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 359 YLCASSRCLCALVLICRR*RSEIATSSCSLLSRAV 255
           ++ A   CLC+L  I    +  +A   C+ L +A+
Sbjct: 213 HILAMLNCLCSLWFINCTAKGRVAVWMCNNLHKAL 247


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/50 (22%), Positives = 22/50 (44%)
 Frame = +1

Query: 1   EVAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETVFKFHRTVKLEP 150
           E     P   F+  R  G+  ++ GGY + +++     ++  HR   + P
Sbjct: 54  ETLRLYPSVHFIS-RTLGQDLITTGGYTLPKESNAIIHIYDVHRNADIYP 102


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 267 QQRTGGSRNF*TSTTTDKHERTETPRA 347
           Q RTG  R   TS+ + + E    PRA
Sbjct: 36  QLRTGEKRKRSTSSQSTEGENDARPRA 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,745
Number of Sequences: 336
Number of extensions: 2166
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)