Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306C12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    27   0.29 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.0  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   8.2  
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    23   8.2  

>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 27.5 bits (58), Expect = 0.29
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 414 HVKSRRSRPGQIHPGEDTRCLI 479
           H K  R R G + P EDT+CLI
Sbjct: 52  HSKLARIRSGVMLPDEDTKCLI 73


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 454 GWICPGRDRRLFT*CGNSLHLRGSLRSVLGADTCV 350
           GW  P +D RL      + H RGS+  ++GADT V
Sbjct: 539 GWKLP-KDVRL---ADPTFHERGSIDMLIGADTFV 569


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +1

Query: 166 VWSADTGASHDPPHDIVMKGQKWFVADTFT 255
           +WS  + A ++PPH   +    + +A   T
Sbjct: 509 IWSNSSPAYYEPPHAYELNPPAYLLASPVT 538


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -3

Query: 339 VSLCARAYLSSLTFRNCDFLLFVVEQSRGEGI 244
           V  C R  L   T  NC+    ++ Q +G  I
Sbjct: 114 VKNCIRNVLRGRTLNNCEKAYLILNQCQGNTI 145


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,843
Number of Sequences: 2352
Number of extensions: 9816
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)